 oriTDB accession number | 100114 |
| Name | oriT_pA172  |
Sequence Completeness  | intact |
| oriT length | 218 nt |
| oriT sequence | GATGGCATGGGGTGATATCCAGTAGCGGAGAGGTTGTTAGCGGGTTTCGGGGCGCAGCCC TGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTAAATATGTTACGGCGGAGTGG TGATTTATGAAAGTGCTTCATGTGACAAGGGAAAAAATGCGGCTACCGGGCGTAAGTGCA ACATGCAGGTAAGGATGAAATGACGCCTCCTCGCTCAC |
| IR (inverted repeat) | [46-53] [57-64] nt (TTCGGGGC..GCCCTGAA) |
| Location of nic site | [97-98] nt |
| Conserved sequence flanking the nic site | CTGG|CTAA |
| Note | ColE1 superfamily |
Visualization of oriT structure Reference| [1] Zioga A et al (2009) CMY-31 and CMY-36 cephalosporinases encoded by ColE1-like plasmids. Antimicrob Agents Chemother. 53(3):1256-9. [PMID:19104021] |
| ID | 109 |
| Name | MobB_pA172 |
| GenBank accession number | YP_001649325 |
| Family | MOBP |
| Length | 156 aa |
| UniProt ID | B0FJX3 |
| PDB ID | _ |
| Pfam | |
| Note | relaxase |
| Protein sequence [Download] | MQQAIRMRIEADSASGKMTETVRQSVNAALTQVEKELKQTGLEQQKPATDAFNQAAGTAK AMIHEMRREMSRYTWKSAIYIAMTMIAVMGGCLWGMYYFIDSGYARVAEMQHMEAVWQKK APLADIKTCDGNPCVKVDISRTFGDKKDTYLIIKGK |
Reference| [1] Zioga A et al (2009) CMY-31 and CMY-36 cephalosporinases encoded by ColE1-like plasmids. Antimicrob Agents Chemother. 53(3):1256-9. [PMID:19104021] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 165 | _ |
| ID | 109 |
| Plasmid name | pA172 |
| GenBank accession number | NC_010259.1 |
| Genome size | 8197 bp |
| Coordinate of oriT [Strand] | 7094..7311 [-] |
| Drug resistance |  CMY-31 cephalosporinase (blaCMY-type gene) |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Salmonella enterica AM17274 [108619] |
Reference| [1] Zioga A et al (2009) CMY-31 and CMY-36 cephalosporinases encoded by ColE1-like plasmids. Antimicrob Agents Chemother. 53(3):1256-9. [PMID:19104021] |