 oriTDB accession number | 100109 |
| Name | oriT_pST12  |
Sequence Completeness  | intact |
| oriT length | 242 nt |
| oriT sequence | GCTCCGTATCTGACATGGGGTGTCGGGGCGAAGCCCTGACCAGGGTAATTGTAATAGCGT GCATGTATGCGCGGTATAACAATTGCACATCCTGTCCTGTCAGCAAGCTCGAATTACCGA CAAAGGCACGGCAGTTTTTTGGCAGTGACAGTATTGTCAGGCAGAAATACCCGTCAAAGC GTCAGACGGCAGAATACCGGCGGTAAAACAGTCGAAAAGTGGTACGCGATATAATCACAC AA |
| IR (inverted repeat) | [22-29] [33-40] nt (GTCGGGGC..GCCCTGAC) |
| Location of nic site | [94-95] nt |
| Conserved sequence flanking the nic site | CATCCTG|T |
| Note | ColE1 superfamily |
Visualization of oriT structure Reference| [1] Vignoli R et al (2006) New TEM-Derived Extended-Spectrum β-Lactamase and Its Genomic Context in Plasmids from Salmonella enterica Serovar Derby Isolates from Uruguay. Antimicrob Agents Chemother. 50(2):781-4. [PMID:16436745] |
| ID | 104 |
| Name | MobA_pST12 |
| GenBank accession number | YP_008574978 |
| Family | MOBP |
| Length | 145 aa |
| UniProt ID | T2MZH7 |
| PDB ID | _ |
| Pfam | |
| Note | plasmid mobilization protein |
| Protein sequence [Download] | MLTGQDVQLLYRAYMHAITITLVRASPRHPMSDTEPCFMTKRSGSNTRRRAISRPVRLTA EEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVG DREYAEVLIAITEYHRALLSRLMAD |
Reference| [1] Vignoli R et al (2006) New TEM-Derived Extended-Spectrum β-Lactamase and Its Genomic Context in Plasmids from Salmonella enterica Serovar Derby Isolates from Uruguay. Antimicrob Agents Chemother. 50(2):781-4. [PMID:16436745] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 156 | _ |
| ID | 104 |
| Plasmid name | pST12 |
| GenBank accession number | NC_022376.1 |
| Genome size | 8275 bp |
| Coordinate of oriT [Strand] | 5989..6230 [-] |
| Drug resistance |  TEM-derived extended-spectrum beta-Lactamase (blaTEM gene) |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Salmonella enterica serovar Derby str. T12 [1401650] |
Reference| [1] Vignoli R et al (2006) New TEM-Derived Extended-Spectrum β-Lactamase and Its Genomic Context in Plasmids from Salmonella enterica Serovar Derby Isolates from Uruguay. Antimicrob Agents Chemother. 50(2):781-4. [PMID:16436745] |