oriTDB
The information of the oriT region
oriTDB accession number 100018
Name oriT_pSU316  insolico
Sequence Completeness intact
oriT length 279 nt
oriT sequence CGCTAGCAGCGCCCCTAGCGGTATCCTATAAAAAAACACACCGCGCCGCTAGCAGCACCC CTAATATAAAATAATGTTTTTTATAAAAATAGTCAGTACCACCCCTACAAAGCGGTGTCG GCGCGTTGTTGTAGCCGCGCCGACACCGCTTTTTTAAATATCATAAAGAGAGTAAGAGAA ACTAATTTTTCATAACTCTCTATTTATAAAGAAAAATCAGCAAAAACTTGTTTTTGCGTG GGGTGTGGTGCTTTTGGTGGTGAGAACCACCAACCTGTT
IR (inverted repeat)[220-227] [230-237] nt  (GCAAAAAC..GTTTTTGC)
Location of nic site [246-247] nt
Conserved sequence flanking the
  nic site 		GTGGGGTGT|GG
Note _
L:220-227;R:230-237;D:246-247
Visualization of oriT structure
Reference
[1] Salazar L et al (1992) Characterization and nucleotide sequence of the oriT-traM-finP region of the IncFVII plasmid pSU233. Mol Gen Genet . 234(3):442-8. [PMID:1406590]
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Information of plasmid
ID 17
Plasmid name pSU316
GenBank accession number X55894.1
Incompatibility group IncFIII/IV
Genome size 76.8 kb
Coordinate of oriT  [Strand] _
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Escherichia coli [562]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU