oriTDB

The information of the oriT region

oriTDB accession number	100011
Name	oriT_pPS12-1
Sequence Completeness	incomplete
oriT length	67 nt
oriT sequence	GCCCGTTGAGTGCCGCAGGCGCGAATAAGGGACAGCGAAGATAGATAACCGGCCCGCCGG TTAGCTA
IR (inverted repeat)	[49-53] [56-60] nt (CCGGC..GCCGG)
Location of nic site	_
Conserved sequence flanking the nic site	_
Note	_
	L:49-53;R:56-60

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GCCCGTTGAGTGCCGCAGGCGCGAATAAGGGACAGCGAAGATAGATAACCGGCCCGCCGG

61

TTAGCTA

Reference

[1] Beil S et al (1999) Genetic and biochemical analyses of the tec operon suggest a route for evolution of chlorobenzene degradation genes. J Bacteriol. 181(1):341-6. [PMID:9864349]

N/A

Information of plasmid

ID	10
Plasmid name	pPS12-1
GenBank accession number	AF073903.1
Incompatibility group	IncP1
Genome size	< 50 kb
Coordinate of oriT [Strand]	_
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	degradation of tetrachlorobenzene
Host bacterium [NCBI Taxonomy ID]	Burkholderia sp. PS12 [36773]

Reference

[1] Beil S et al (1999) Genetic and biochemical analyses of the tec operon suggest a route for evolution of chlorobenzene degradation genes. J Bacteriol. 181(1):341-6. [PMID:9864349]