Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 3508476..3509251 Replicon chromosome
Accession NZ_CP027160
Organism Klebsiella pneumoniae strain AR_0361

Toxin (Protein)


Gene name TacT2 Uniprot ID A0A1Q4Q548
Locus tag CSB98_RS18470 Protein ID WP_004150910.1
Coordinates 3508476..3508961 (-) Length 162 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID W8UEW1
Locus tag CSB98_RS18475 Protein ID WP_004150912.1
Coordinates 3508958..3509251 (-) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSB98_RS18440 3503645..3505012 - 1368 WP_004150905.1 replicative DNA helicase -
CSB98_RS18445 3505005..3505388 - 384 WP_004150906.1 hypothetical protein -
CSB98_RS18450 3505388..3506260 - 873 WP_004188557.1 ParA family protein -
CSB98_RS18460 3506866..3507082 - 217 Protein_3364 transposase -
CSB98_RS18465 3507179..3507772 - 594 WP_004188553.1 hypothetical protein -
CSB98_RS18470 3508476..3508961 - 486 WP_004150910.1 GNAT family N-acetyltransferase Toxin
CSB98_RS18475 3508958..3509251 - 294 WP_004150912.1 DUF1778 domain-containing protein Antitoxin
CSB98_RS18480 3509896..3511272 + 1377 WP_004217775.1 cystathionine beta-synthase -
CSB98_RS18485 3511283..3512431 + 1149 WP_004150915.1 PLP-dependent aspartate aminotransferase family protein -
CSB98_RS18490 3512432..3513343 - 912 WP_004188550.1 LysR family transcriptional regulator -
CSB98_RS18495 3513441..3514043 + 603 WP_002916735.1 short chain dehydrogenase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Integrative and Conjugative Element - - 3450254..3509502 59248
flank IS/Tn - - 3506930..3507082 152


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(41-143)

Antitoxin

Vibrio phage ICP1, Orf50

(3-95)


Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 17551.59 Da        Isoelectric Point: 8.8818

>T97516 WP_004150910.1 NZ_CP027160:c3508961-3508476 [Klebsiella pneumoniae]
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A

Download         Length: 486 bp

>T97516 NZ_CP027160:c3508961-3508476 [Klebsiella pneumoniae]
ATGATCTCGGCACCAGAACCGCTTCATGCCGGGCATATTCTTACCCCGTTTTGCTGCGGTATAGATTCCATGGATCACTG
GCTGAAACAGCGGGCGATGAAAAATCAGGTTACTGGCGCATCCCGCACCTTTGTCTGCTGCGACGACGCGAAGGTGATGG
CTTACTACTCACTGGCTTCCAGCGCTGTGACGACAAATACTGCGCCGGGTCGTTTTCGCCGCAATATGCCTGCCCCGATC
CCGGTTGTGGTACTGGGTCGTCTGGCGGTGGATAAATCACTACATGGGAAAGGTGTCGGGCGGGCCCTGGTACGTGATGC
CGGGCTGCGTGTGATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTTCACGCCCTGTCGGATGAAGCACGGG
ATTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGAGGGATTTGGTTAAT
GCCTGA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10901.46 Da        Isoelectric Point: 6.3783

>AT97516 WP_004150912.1 NZ_CP027160:c3509251-3508958 [Klebsiella pneumoniae]
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE

Download         Length: 294 bp

>AT97516 NZ_CP027160:c3509251-3508958 [Klebsiella pneumoniae]
ATGCCAGCCGCAAACAGCATGTCCATAAAACGCGAAACGTTAAATCTGCGCATTAAACCTGCCGAACGCGATCTTATTGA
TCGGGCGGCGAAAGCCAGAGGGAAAAACCGCACAGACTTTGTGCTGGAGGCCGCCCGCGCTGCCGCTGAGGAAGCGCTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATCAGGAATTTCTCGCTCGTCTGGATCAGGCTCCTGCACCTAAT
GCCGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAACAGGAAGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1Q4Q548

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GVL4

References