Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrG/- |
Location | 15535..15832 | Replicon | chromosome |
Accession | NZ_CP026533 | ||
Organism | Bacillus velezensis strain DKU_NT_04 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | C3438_RS22370 | Protein ID | WP_009967548.1 |
Coordinates | 15535..15651 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 15646..15832 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
C3438_RS00055 | 11063..12223 | + | 1161 | WP_079891309.1 | tetratricopeptide repeat protein | - |
C3438_RS00060 | 12387..13637 | - | 1251 | WP_104842634.1 | UV damage repair protein UvrX | - |
C3438_RS00065 | 13630..13962 | - | 333 | WP_014472056.1 | YolD-like family protein | - |
C3438_RS00070 | 14190..14963 | - | 774 | WP_104842635.1 | sporulation protein YunB | - |
C3438_RS00075 | 15092..15295 | - | 204 | WP_021493638.1 | hypothetical protein | - |
C3438_RS22370 | 15535..15651 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- | 15646..15832 | - | 187 | NuclAT_0 | - | Antitoxin |
- | 15646..15832 | - | 187 | NuclAT_0 | - | Antitoxin |
- | 15646..15832 | - | 187 | NuclAT_0 | - | Antitoxin |
- | 15646..15832 | - | 187 | NuclAT_0 | - | Antitoxin |
C3438_RS00085 | 16063..16551 | - | 489 | WP_104842636.1 | antitoxin YezG family protein | - |
C3438_RS00090 | 16557..18467 | - | 1911 | WP_104842637.1 | ribonuclease YeeF family protein | - |
C3438_RS00095 | 18643..19608 | + | 966 | WP_104842638.1 | thermonuclease family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 209..21397 | 21188 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T95072 WP_009967548.1 NZ_CP026533:15535-15651 [Bacillus velezensis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T95072 NZ_CP026533:15535-15651 [Bacillus velezensis]
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
Antitoxin
Download Length: 187 bp
>AT95072 NZ_CP026533:c15832-15646 [Bacillus velezensis]
AATGATACAAATAATTATTTATTGCATTTTGATTTGTGGAAATGCATAAAATAAAAAAAGACCTGGGGTGCGCTAACACC
CACTGGTCATTGTTTGTACAAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGG
TGTCCAAACTCAAGGGAAGGTCTATTT
AATGATACAAATAATTATTTATTGCATTTTGATTTGTGGAAATGCATAAAATAAAAAAAGACCTGGGGTGCGCTAACACC
CACTGGTCATTGTTTGTACAAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGG
TGTCCAAACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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