91163

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) unclassified/-
Location 2976618..2977266 Replicon chromosome
Accession NZ_CP025601
Organism Mycobacterium tuberculosis strain GG-90-10

Toxin (Protein)


Gene name novel[antitoxin] Uniprot ID P9WJ12
Locus tag C0095_RS14575 Protein ID WP_003899414.1
Coordinates 2976618..2976941 (-) Length 108 a.a.

Antitoxin (Protein)


Gene name novel[toxin] Uniprot ID P9WJ10
Locus tag C0095_RS14580 Protein ID WP_003899415.1
Coordinates 2977021..2977266 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C0095_RS14550 2972184..2973445 + 1262 WP_087902221.1 IS3-like element IS987 family transposase -
C0095_RS14560 2973819..2975258 - 1440 WP_003899411.1 phage major capsid protein -
C0095_RS14565 2975266..2975799 - 534 WP_003899412.1 HK97 family phage prohead protease -
C0095_RS14570 2975960..2976451 - 492 WP_003900541.1 phage terminase small subunit P27 family -
C0095_RS14575 2976618..2976941 - 324 WP_003899414.1 type II toxin-antitoxin system toxin Toxin
C0095_RS14580 2977021..2977266 - 246 WP_003899415.1 type II toxin-antitoxin system antitoxin Antitoxin
C0095_RS14585 2977263..2978690 - 1428 WP_003899416.1 DUF3631 domain-containing protein -
C0095_RS14590 2978692..2979084 - 393 WP_003899417.1 DUF2742 domain-containing protein -
C0095_RS14595 2979081..2979341 - 261 WP_003899418.1 helix-turn-helix domain-containing protein -
C0095_RS14600 2979358..2979720 - 363 WP_003900543.1 hypothetical protein -
C0095_RS14605 2979723..2980850 - 1128 WP_003899420.1 site-specific integrase -
C0095_RS14610 2980995..2981222 - 228 WP_003899421.1 hypothetical protein -
C0095_RS14615 2981219..2981608 - 390 WP_003899422.1 hypothetical protein -
C0095_RS14620 2981514..2981786 + 273 WP_003900544.1 hypothetical protein -
C0095_RS14625 2981885..2982118 + 234 WP_003413717.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 2970575..2980850 10275


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-92)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 108 a.a.        Molecular weight: 12359.82 Da        Isoelectric Point: 8.6717

>T91163 WP_003899414.1 NZ_CP025601:c2976941-2976618 [Mycobacterium tuberculosis]
MTHKRTKRQPAIAAGLNAPRRNRVGRQHGWPADVPSAEQRRAQRQRDLEAIRRAYAEMVATSHEIDDDTAELALLSMHLD
DEQRRLEAGMKLGWHPYHFPDEPDSKQ

Download         Length: 324 bp

>T91163 NZ_CP025601:c2976941-2976618 [Mycobacterium tuberculosis]
TTGACCCACAAGCGCACTAAACGCCAGCCAGCCATCGCCGCAGGGCTCAACGCCCCGCGTCGGAATCGCGTTGGGCGGCA
ACATGGTTGGCCGGCCGACGTTCCGTCCGCCGAGCAGCGCCGCGCCCAACGGCAGCGCGACCTCGAGGCTATCCGCCGAG
CGTACGCCGAGATGGTGGCGACATCACACGAAATCGACGACGACACAGCCGAACTGGCGCTGTTGTCGATGCATCTCGAC
GATGAGCAGCGCCGGCTTGAGGCGGGGATGAAGCTCGGCTGGCATCCGTATCACTTCCCCGACGAACCCGACAGCAAACA
GTGA

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 7697.71 Da        Isoelectric Point: 4.8565

>AT91163 WP_003899415.1 NZ_CP025601:c2977266-2977021 [Mycobacterium tuberculosis]
MSGHALAARTLLAAADELVGGPPVEASAAALAGDAAGAWRTAAVELARALVRAVAESHGVAAVLFAATAAAAAAVDRGDP
P

Download         Length: 246 bp

>AT91163 NZ_CP025601:c2977266-2977021 [Mycobacterium tuberculosis]
ATGAGCGGCCACGCGTTGGCTGCTCGGACGTTGCTGGCCGCCGCGGACGAGCTTGTCGGCGGCCCGCCAGTCGAGGCTTC
GGCCGCCGCGCTGGCCGGCGACGCCGCGGGCGCATGGCGGACCGCGGCCGTCGAGCTTGCGCGAGCGTTGGTCCGCGCTG
TGGCGGAGTCGCACGGCGTCGCGGCCGTTTTGTTCGCCGCGACGGCCGCCGCGGCGGCGGCCGTCGACCGGGGTGATCCG
CCGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A045IHC4

Antitoxin

Source ID Structure
AlphaFold DB A0A806JR81

References