Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 2856223..2856916 Replicon chromosome
Accession NZ_CP024232
Organism Escherichia coli O6:H16 strain 2014EL-1346-6

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag CNZ63_RS14900 Protein ID WP_000415584.1
Coordinates 2856223..2856519 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag CNZ63_RS14905 Protein ID WP_000650107.1
Coordinates 2856521..2856916 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CNZ63_RS14860 2851311..2851625 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
CNZ63_RS14865 2851656..2852237 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
CNZ63_RS14875 2852556..2852888 + 333 WP_000917686.1 DUF2645 family protein -
CNZ63_RS14880 2852934..2854283 - 1350 WP_000673409.1 two-component system sensor histidine kinase QseC -
CNZ63_RS14885 2854280..2854939 - 660 WP_001221493.1 two-component system response regulator QseB -
CNZ63_RS14890 2855091..2855483 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
CNZ63_RS14895 2855536..2856018 + 483 WP_000183505.1 transcriptional regulator -
CNZ63_RS14900 2856223..2856519 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
CNZ63_RS14905 2856521..2856916 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
CNZ63_RS14910 2857049..2858656 + 1608 WP_001295629.1 ABC transporter substrate-binding protein -
CNZ63_RS14915 2858794..2861052 + 2259 WP_001281866.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T87153 WP_000415584.1 NZ_CP024232:2856223-2856519 [Escherichia coli O6:H16]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

>T87153 NZ_CP024232:2856223-2856519 [Escherichia coli O6:H16]
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT87153 WP_000650107.1 NZ_CP024232:2856521-2856916 [Escherichia coli O6:H16]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp

>AT87153 NZ_CP024232:2856521-2856916 [Escherichia coli O6:H16]
ATGAAATGTCCGGTTTGCCACCAGGGAGAAATGGTTTCTGGCATTAAAGATATTCCATACACCTTCCGTGGACGAAAAAC
AGTATTGAAAGGTATCCACGGTTTATATTGTGTCCATTGCGAAGAGAGCATCATGAATAAAGAAGAGTCAGATGCTTTCA
TGGCGCAAGTAAAGGCATTTCGGGCTTCGGTGAATGCCGAAACAGTGGCACCTGAATTTATAGTGAAGGTTCGAAAAAAG
CTCTCTCTTACCCAAAAAGAGGCAAGCGAAATTTTTGGGGGAGGTGTAAATGCGTTTTCGCGTTACGAAAAAGGCAATGC
CCAACCTCATCCTTCCACAATCAAACTTTTACGTGTTCTGGATAAGCATCCAGAACTATTGAATGAAATCCGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References