Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprG2-sprA1AS/-
Location 1007838..1008056 Replicon chromosome
Accession NZ_CP023076
Organism Staphylococcus argenteus strain XNO62

Toxin (Protein)


Gene name SprG2 Uniprot ID -
Locus tag CJ017_RS04960 Protein ID WP_031787354.1
Coordinates 1007838..1007945 (+) Length 36 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1007940..1008056 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CJ017_RS04935 1004517..1005086 - 570 WP_000287261.1 competence protein ComK -
CJ017_RS04940 1005296..1005514 + 219 WP_000876831.1 IDEAL domain-containing protein -
CJ017_RS04945 1005595..1006581 - 987 WP_000668810.1 lipoate--protein ligase -
CJ017_RS04950 1006776..1006952 + 177 WP_000214898.1 YkvS family protein -
CJ017_RS04955 1006967..1007569 + 603 WP_031787353.1 CPBP family intramembrane metalloprotease -
CJ017_RS04960 1007838..1007945 + 108 WP_031787354.1 putative holin-like toxin Toxin
- 1007940..1008056 - 117 - - Antitoxin
CJ017_RS04965 1008580..1008861 + 282 Protein_946 lactococcin 972 family bacteriocin -
CJ017_RS04970 1008905..1010869 + 1965 WP_031787355.1 bacteriocin-associated integral membrane family protein -
CJ017_RS04975 1010872..1011192 + 321 WP_031787356.1 YxeA family protein -
CJ017_RS04980 1011189..1011830 + 642 WP_031787357.1 ABC transporter ATP-binding protein -
CJ017_RS04985 1011918..1012178 - 261 WP_169929182.1 hypothetical protein -
CJ017_RS04990 1012493..1012780 + 288 WP_000410715.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(3-35)


Sequences

Toxin        


Download         Length: 36 a.a.        Molecular weight: 3815.72 Da        Isoelectric Point: 10.8004

>T80463 WP_031787354.1 NZ_CP023076:1007838-1007945 [Staphylococcus argenteus]
VISIANALHLMLSFGMFIVTFIGIVVAIININNKK

Download         Length: 108 bp

>T80463 NZ_CP023076:1007838-1007945 [Staphylococcus argenteus]
GTGATATCTATTGCAAACGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTAACTTTCATTGGTATAGTAGTCGC
AATAATTAATATAAACAATAAAAAATAA

Antitoxin


Download         Length: 117 bp

>AT80463 NZ_CP023076:c1008056-1007940 [Staphylococcus argenteus]
TGTAAAAAGACGACATGCAGGAACATGTCGCCTATTGAGCCCGTTAAAAAGACGGTGACTAAATGAGATTTTCTTTAACC
ATCATTCGTTGTCAAAGTTTTGAAATGATGGTTATTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References