Detailed information of TA system TA079989

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): sprG-sprF/-
• Location: 1004436..1004685
• Replicon: chromosome
• Accession: NZ_CP022901
• Organism: Staphylococcus aureus strain 466

Toxin (Protein)

• Gene name: SprG2
• Uniprot ID: -
• Locus tag: CGP97_RS04945
• Protein ID: WP_000623369.1
• Coordinates: 1004436..1004543 (+)
• Length: 36 a.a.

Antitoxin (RNA)

Gene name	SprF2
Locus tag	-
Coordinates	1004538..1004685 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CGP97_RS04920	1001109..1001678	-	570	WP_000287265.1	competence protein ComK	-
CGP97_RS04925	1001888..1002106	+	219	WP_000876825.1	IDEAL domain-containing protein	-
CGP97_RS04930	1002187..1003173	-	987	WP_000668820.1	lipoate--protein ligase	-
CGP97_RS04935	1003372..1003548	+	177	WP_000214898.1	YkvS family protein	-
CGP97_RS04940	1003563..1004165	+	603	WP_001033867.1	CPBP family intramembrane metalloprotease	-
CGP97_RS04945	1004436..1004543	+	108	WP_000623369.1	putative holin-like toxin	Toxin
-	1004538..1004685	-	148	-	-	Antitoxin
CGP97_RS04950	1005082..1005183	+	102	WP_001790623.1	hypothetical protein	-
CGP97_RS04955	1005193..1005465	+	273	WP_001794574.1	lactococcin 972 family bacteriocin	-
CGP97_RS04960	1005509..1007473	+	1965	WP_000870819.1	bacteriocin-associated integral membrane family protein	-
CGP97_RS04965	1007476..1007796	+	321	WP_000873929.1	YxeA family protein	-
CGP97_RS04970	1007793..1008434	+	642	WP_000571191.1	ABC transporter ATP-binding protein	-
CGP97_RS04975	1008522..1008812	-	291	WP_001791476.1	hypothetical protein	-
CGP97_RS04980	1009153..1009428	+	276	WP_115283836.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (3-35)

Sequences

Toxin

Protein

• Length: 36 a.a.
• Molecular weight: 3801.69 Da
• Isoelectric Point: 10.8004

>T79989 WP_000623369.1 NZ_CP022901:1004436-1004543 [Staphylococcus aureus]
VISIANALHLMLSFGMFIVTFIGVVVAIINLNNKK

Nucleotide

• Length: 108 bp

>T79989 NZ_CP022901:1004436-1004543 [Staphylococcus aureus]
GTGATATCTATTGCAAACGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTGTAGTAGTCGC
AATAATTAATTTAAACAATAAAAAATAA

Antitoxin

Nucleotide

• Length: 148 bp

>AT79989 NZ_CP022901:c1004685-1004538 [Staphylococcus aureus]
CAATTAAATAAAAGATATGTTACTATAAAAATGTAAAAAGACGACATGCAGGAACATGTCGCCTAATGAGCCCGTTAAAA
AGACGGTGACTAAATGAGATTTTCTTTAACCATCATTCGTTGTCAAAGTTTTGAAATGATGGTTATTT

Structures

Antitoxin