Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprA1-sprA1AS/-
Location 479298..479455 Replicon chromosome
Accession NZ_CP022056
Organism Staphylococcus saprophyticus strain FDAARGOS_336

Toxin (Protein)


Gene name sprA1 Uniprot ID -
Locus tag CEQ14_RS12955 Protein ID WP_002441941.1
Coordinates 479360..479455 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 479298..479331 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CEQ14_RS02535 475085..475918 + 834 WP_069795225.1 aldo/keto reductase -
CEQ14_RS02540 476385..476684 - 300 WP_011304021.1 hypothetical protein -
CEQ14_RS02545 477061..477294 + 234 WP_047505119.1 ferrous iron transport protein A -
CEQ14_RS12950 477355..477420 - 66 WP_162009580.1 type I toxin-antitoxin system Fst family toxin -
CEQ14_RS02550 477608..479002 - 1395 WP_069795224.1 RES family NAD+ phosphorylase -
- 479298..479331 + 34 - - Antitoxin
CEQ14_RS12955 479360..479455 - 96 WP_002441941.1 type I toxin-antitoxin system Fst family toxin Toxin
CEQ14_RS02555 479758..480516 - 759 WP_069795223.1 MerR family transcriptional regulator -
CEQ14_RS02560 480626..481189 - 564 WP_047505113.1 helix-turn-helix domain-containing protein -
CEQ14_RS02565 481383..482840 - 1458 WP_063488860.1 carbon starvation protein A -
CEQ14_RS02570 483048..483887 - 840 WP_002481957.1 ParB/RepB/Spo0J family partition protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3560.34 Da        Isoelectric Point: 9.9256

>T78304 WP_002441941.1 NZ_CP022056:c479455-479360 [Staphylococcus saprophyticus]
MLMIFVHIIAPVISGCAVAYFTYWLSSKRNK

Download         Length: 96 bp

>T78304 NZ_CP022056:c479455-479360 [Staphylococcus saprophyticus]
ATGCTTATGATCTTCGTTCACATCATTGCACCAGTCATTAGTGGCTGTGCAGTTGCGTATTTTACTTATTGGCTTAGTAG
TAAACGCAATAAATAG

Antitoxin


Download         Length: 34 bp

>AT78304 NZ_CP022056:479298-479331 [Staphylococcus saprophyticus]
CACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References