Detailed information of TA system TA077867

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): txpA-ratA/-
• Location: 2415012..2415335
• Replicon: chromosome
• Accession: NZ_CP021911
• Organism: Bacillus sp. MD-5

Toxin (Protein)

• Gene name: txpA
• Uniprot ID: -
• Locus tag: CDO84_RS12140
• Protein ID: WP_024122157.1
• Coordinates: 2415012..2415191 (+)
• Length: 60 a.a.

Antitoxin (RNA)

Gene name	ratA
Locus tag	-
Coordinates	2415115..2415335 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CDO84_RS12130	2414238..2414375	-	138	WP_021480099.1	hypothetical protein	-
CDO84_RS12135	2414417..2414866	-	450	WP_024122156.1	phage portal protein	-
CDO84_RS12140	2415012..2415191	+	180	WP_024122157.1	type I toxin-antitoxin system toxin TxpA	Toxin
-	2415115..2415335	-	221	NuclAT_0	-	Antitoxin
-	2415115..2415335	-	221	NuclAT_0	-	Antitoxin
-	2415115..2415335	-	221	NuclAT_0	-	Antitoxin
-	2415115..2415335	-	221	NuclAT_0	-	Antitoxin
CDO84_RS21415	2415571..2415660	+	90	WP_075058862.1	type I toxin-antitoxin system toxin BsrH	-
CDO84_RS12150	2415953..2416396	-	444	WP_003229930.1	phage tail tube protein	-
CDO84_RS12155	2416399..2417799	-	1401	WP_040082441.1	phage tail sheath family protein	-
CDO84_RS12160	2417800..2417991	-	192	WP_082032961.1	hypothetical protein	-
CDO84_RS12165	2417988..2418425	-	438	WP_040082440.1	hypothetical protein	-
CDO84_RS12170	2418438..2418941	-	504	WP_040082439.1	HK97 gp10 family phage protein	-
CDO84_RS12175	2418938..2419300	-	363	WP_040082438.1	YqbH/XkdH family protein	-
CDO84_RS12180	2419297..2419692	-	396	WP_015714318.1	DUF3199 family protein	-
CDO84_RS12185	2419697..2420008	-	312	WP_040082437.1	YqbF domain-containing protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	2375277..2444984	69707

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 60 a.a.
• Molecular weight: 6739.19 Da
• Isoelectric Point: 8.0370

>T77867 WP_024122157.1 NZ_CP021911:2415012-2415191 [Bacillus sp. MD-5]
MSTYESLMVMIGFANLIGGIMTWVLSLLTLLFMLRKKDTHPIYITVKEKCLHEDPPIKG

Nucleotide

• Length: 180 bp

>T77867 NZ_CP021911:2415012-2415191 [Bacillus sp. MD-5]
ATGTCGACCTATGAATCTTTAATGGTCATGATCGGCTTTGCCAATTTAATAGGCGGGATTATGACATGGGTACTATCTCT
TTTAACATTATTATTCATGCTTAGAAAAAAAGACACTCATCCTATTTACATTACTGTAAAGGAAAAGTGTCTACACGAGG
ACCCTCCTATTAAAGGGTAG

Antitoxin

Nucleotide

• Length: 221 bp

>AT77867 NZ_CP021911:c2415335-2415115 [Bacillus sp. MD-5]
CAAGCAAAAGTATTGCAACTACTGGCGTAAGCTTATAGTTGGTACCACATTACCACAATACAACTTGTTAATGTGTGTTA
CTTTCATGAGAAATGCATAAAATATAAAAGCCAGAGTGTTGCAGCACTCTAGCTTTTAAAGAAACTACCCTTTAATAGGA
GGGTCCTCGTGTAGACACTTTTCCTTTACAGTAATGTAAATAGGATGAGTGTCTTTTTTTC

Structures

Antitoxin