Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprG-sprF/- |
Location | 2153436..2153699 | Replicon | chromosome |
Accession | NZ_CP020959 | ||
Organism | Staphylococcus aureus strain H489 |
Toxin (Protein)
Gene name | SprG3 | Uniprot ID | Q2FWA7 |
Locus tag | B9T45_RS11220 | Protein ID | WP_001802298.1 |
Coordinates | 2153595..2153699 (-) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | SprF4 | ||
Locus tag | - | ||
Coordinates | 2153436..2153600 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
B9T45_RS11200 | 2149619..2150284 | - | 666 | WP_001024094.1 | SDR family oxidoreductase | - |
B9T45_RS11205 | 2150436..2150756 | + | 321 | WP_000003759.1 | Zn(II)-responsive metalloregulatory transcriptional repressor CzrA | - |
B9T45_RS11210 | 2150758..2151738 | + | 981 | WP_000019744.1 | CDF family zinc efflux transporter CzrB | - |
B9T45_RS11215 | 2152004..2153095 | + | 1092 | WP_000495671.1 | lytic regulatory protein | - |
- | 2153436..2153600 | + | 165 | - | - | Antitoxin |
B9T45_RS11220 | 2153595..2153699 | - | 105 | WP_001802298.1 | hypothetical protein | Toxin |
B9T45_RS14400 | 2153860..2154343 | - | 484 | Protein_2061 | recombinase family protein | - |
B9T45_RS11230 | 2154386..2155522 | - | 1137 | WP_000115564.1 | SAP domain-containing protein | - |
B9T45_RS11235 | 2155811..2155903 | + | 93 | WP_001790138.1 | hypothetical protein | - |
B9T45_RS11240 | 2156608..2157465 | - | 858 | WP_129950692.1 | Cof-type HAD-IIB family hydrolase | - |
B9T45_RS11245 | 2157533..2158315 | - | 783 | WP_129950693.1 | ABC transporter ATP-binding protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3906.77 Da Isoelectric Point: 5.5724
>T75811 WP_001802298.1 NZ_CP020959:c2153699-2153595 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
Download Length: 105 bp
>T75811 NZ_CP020959:c2153699-2153595 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTTATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTTATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
Antitoxin
Download Length: 165 bp
>AT75811 NZ_CP020959:2153436-2153600 [Staphylococcus aureus]
GTAGTAAGTAGAAGCAAAAGATGAAAATCATTAACTCTTGAAACACAAAAAGGGCAACACTCGGAAACATGTTACCCTAA
TGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTCAAAGCGAATAGAAGGT
TATTT
GTAGTAAGTAGAAGCAAAAGATGAAAATCATTAACTCTTGAAACACAAAAAGGGCAACACTCGGAAACATGTTACCCTAA
TGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTCAAAGCGAATAGAAGGT
TATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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