Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1157774..1158486 Replicon chromosome
Accession NZ_CP020947
Organism Rhizobium sp. CIAT894

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag RHEC894_RS05725 Protein ID WP_010069643.1
Coordinates 1158184..1158486 (-) Length 101 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag RHEC894_RS05720 Protein ID WP_085736578.1
Coordinates 1157774..1158181 (-) Length 136 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RHEC894_RS05685 1152889..1153254 - 366 WP_085736574.1 MmcQ/YjbR family DNA-binding protein -
RHEC894_RS05690 1153292..1153480 - 189 WP_010068806.1 hypothetical protein -
RHEC894_RS05695 1153591..1154487 + 897 WP_010068807.1 LysR family transcriptional regulator -
RHEC894_RS05700 1154490..1155155 - 666 WP_085736575.1 glutathione S-transferase family protein -
RHEC894_RS05705 1155273..1155845 - 573 WP_085736576.1 NAD(P)H-dependent oxidoreductase -
RHEC894_RS05710 1155923..1156591 - 669 WP_010069640.1 nitroreductase -
RHEC894_RS05715 1156656..1157567 - 912 WP_085736577.1 MBL fold metallo-hydrolase -
RHEC894_RS05720 1157774..1158181 - 408 WP_085736578.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
RHEC894_RS05725 1158184..1158486 - 303 WP_010069643.1 type II toxin-antitoxin system MqsR family toxin Toxin
RHEC894_RS05730 1158651..1160018 - 1368 WP_085736579.1 TIGR03808 family TAT-translocated repetitive protein -
RHEC894_RS05735 1160268..1162565 + 2298 WP_085736580.1 EAL domain-containing protein -
RHEC894_RS05740 1162602..1163324 - 723 WP_010063632.1 LuxR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(2-99)

Antitoxin

Zinc finger, MqsA-type

(5-50)


Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 11161.83 Da        Isoelectric Point: 9.9343

>T75760 WP_010069643.1 NZ_CP020947:c1158486-1158184 [Rhizobium sp. CIAT894]
MEKRKAHYNLAAIIAIVRERKAAAFTKSAIDGGRSMGLTTSEMIDVVSGLRNTHLYKSMTTYNDTTIWQDVYHANTPAGK
AYIKVTLREDGAPVIQFKEL

Download         Length: 303 bp

>T75760 NZ_CP020947:c1158486-1158184 [Rhizobium sp. CIAT894]
ATGGAAAAGCGGAAGGCCCACTACAACCTCGCGGCGATCATCGCCATCGTCAGGGAGCGAAAGGCGGCAGCCTTCACCAA
AAGCGCCATCGATGGCGGGAGATCGATGGGATTGACCACTTCGGAGATGATCGACGTCGTCTCCGGGCTTAGGAATACCC
ACCTTTATAAGTCGATGACGACGTATAACGACACCACAATCTGGCAGGATGTTTATCACGCCAATACGCCGGCCGGGAAG
GCTTATATCAAAGTCACGCTGAGGGAAGACGGTGCACCCGTCATCCAATTCAAGGAGTTGTAA

Antitoxin


Download         Length: 136 a.a.        Molecular weight: 15137.12 Da        Isoelectric Point: 7.2432

>AT75760 WP_085736578.1 NZ_CP020947:c1158181-1157774 [Rhizobium sp. CIAT894]
MARICVCCDAKSEMTPFFNETHHIAFRNLKADVEGLSGFRCGACGEIEYDQVSAERYAQASDALVLQDRRAVGEDLRRIR
KKLRLNQTEASALTGGGHNAFSRYETGKVSPPPAVVNLFRLLERHPDDVEELRRA

Download         Length: 408 bp

>AT75760 NZ_CP020947:c1158181-1157774 [Rhizobium sp. CIAT894]
ATGGCCAGGATATGTGTTTGCTGTGACGCAAAGTCCGAAATGACGCCATTCTTCAACGAAACTCACCACATTGCTTTTCG
CAATCTGAAAGCGGACGTCGAAGGCTTGTCGGGGTTTCGTTGCGGCGCATGCGGCGAGATCGAGTATGATCAGGTCAGTG
CTGAGCGTTATGCCCAGGCCAGTGATGCGCTGGTTCTGCAGGATAGGCGAGCGGTCGGCGAGGATCTGCGTCGAATTCGC
AAGAAACTGCGCCTCAATCAGACTGAAGCGTCTGCGCTGACGGGGGGTGGGCACAATGCCTTCTCTCGCTATGAGACGGG
AAAGGTCAGTCCGCCGCCTGCCGTCGTCAATCTCTTTCGTCTGCTCGAGCGGCATCCGGACGATGTAGAGGAATTGCGAC
GCGCATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References