Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprG-sprF/- |
Location | 2624341..2624603 | Replicon | chromosome |
Accession | NZ_CP020714 | ||
Organism | Staphylococcus aureus strain K18 |
Toxin (Protein)
Gene name | SprG3 | Uniprot ID | Q2FWA7 |
Locus tag | B7474_RS13750 | Protein ID | WP_001802298.1 |
Coordinates | 2624341..2624445 (+) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | SprF2 | ||
Locus tag | - | ||
Coordinates | 2624440..2624603 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
B7474_RS13725 | 2621138..2621920 | + | 783 | WP_000908180.1 | ABC transporter ATP-binding protein | - |
B7474_RS13730 | 2621988..2622845 | + | 858 | WP_000370930.1 | Cof-type HAD-IIB family hydrolase | - |
B7474_RS13740 | 2623503..2623661 | - | 159 | WP_001792784.1 | hypothetical protein | - |
B7474_RS13750 | 2624341..2624445 | + | 105 | WP_001802298.1 | hypothetical protein | Toxin |
- | 2624440..2624603 | - | 164 | - | - | Antitoxin |
B7474_RS13755 | 2624887..2625978 | - | 1092 | WP_000495681.1 | hypothetical protein | - |
B7474_RS13760 | 2626244..2627224 | - | 981 | WP_000019743.1 | CDF family zinc efflux transporter CzrB | - |
B7474_RS13765 | 2627226..2627546 | - | 321 | WP_000003759.1 | Zn(II)-responsive metalloregulatory transcriptional repressor CzrA | - |
B7474_RS13770 | 2627698..2628363 | + | 666 | WP_001024095.1 | SDR family oxidoreductase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3906.77 Da Isoelectric Point: 5.5724
>T75338 WP_001802298.1 NZ_CP020714:2624341-2624445 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
Download Length: 105 bp
>T75338 NZ_CP020714:2624341-2624445 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
Antitoxin
Download Length: 164 bp
>AT75338 NZ_CP020714:c2624603-2624440 [Staphylococcus aureus]
GTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGGAAACATGTTACCCTAA
TGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAATGCCGGTCAAAGCGAATAGAAGGTT
ATTT
GTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGGAAACATGTTACCCTAA
TGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAATGCCGGTCAAAGCGAATAGAAGGTT
ATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|