Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprG-sprF/- |
Location | 1006893..1007142 | Replicon | chromosome |
Accession | NZ_CP019592 | ||
Organism | Staphylococcus aureus strain GD5 |
Toxin (Protein)
Gene name | SprG2 | Uniprot ID | - |
Locus tag | BZJ79_RS05010 | Protein ID | WP_000623369.1 |
Coordinates | 1006893..1007000 (+) | Length | 36 a.a. |
Antitoxin (RNA)
Gene name | SprF2 | ||
Locus tag | - | ||
Coordinates | 1006995..1007142 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BZJ79_RS04985 | 1003567..1004136 | - | 570 | WP_000287265.1 | competence protein ComK | - |
BZJ79_RS04990 | 1004346..1004564 | + | 219 | WP_000876826.1 | IDEAL domain-containing protein | - |
BZJ79_RS04995 | 1004645..1005631 | - | 987 | WP_000668814.1 | lipoate--protein ligase | - |
BZJ79_RS05000 | 1005830..1006006 | + | 177 | WP_000214898.1 | YkvS family protein | - |
BZJ79_RS05005 | 1006021..1006623 | + | 603 | WP_001033867.1 | CPBP family intramembrane metalloprotease | - |
BZJ79_RS05010 | 1006893..1007000 | + | 108 | WP_000623369.1 | putative holin-like toxin | Toxin |
- | 1006995..1007142 | - | 148 | - | - | Antitoxin |
BZJ79_RS05015 | 1007635..1007919 | + | 285 | WP_000790905.1 | lactococcin 972 family bacteriocin | - |
BZJ79_RS05020 | 1007963..1009927 | + | 1965 | WP_000870811.1 | bacteriocin-associated integral membrane family protein | - |
BZJ79_RS05025 | 1009930..1010250 | + | 321 | WP_000668623.1 | YxeA family protein | - |
BZJ79_RS05030 | 1010247..1010888 | + | 642 | WP_000571192.1 | ABC transporter ATP-binding protein | - |
BZJ79_RS05035 | 1010976..1011266 | - | 291 | WP_001796515.1 | hypothetical protein | - |
BZJ79_RS05040 | 1011356..1011544 | + | 189 | WP_157958947.1 | poly(glycerol-phosphate) alpha-glucosyltransferase | - |
BZJ79_RS05045 | 1011633..1011989 | - | 357 | WP_000766009.1 | DoxX family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 3801.69 Da Isoelectric Point: 10.8004
>T72751 WP_000623369.1 NZ_CP019592:1006893-1007000 [Staphylococcus aureus]
VISIANALHLMLSFGMFIVTFIGVVVAIINLNNKK
VISIANALHLMLSFGMFIVTFIGVVVAIINLNNKK
Download Length: 108 bp
>T72751 NZ_CP019592:1006893-1007000 [Staphylococcus aureus]
GTGATATCTATTGCAAATGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTGTAGTAGTCGC
AATAATTAATTTAAACAATAAAAAATAA
GTGATATCTATTGCAAATGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTGTAGTAGTCGC
AATAATTAATTTAAACAATAAAAAATAA
Antitoxin
Download Length: 148 bp
>AT72751 NZ_CP019592:c1007142-1006995 [Staphylococcus aureus]
CAATTAAATAAAAGATATGTTACTATAAAAATGTAAAAAGACGACATGCAGTAACATGTCGCCTAATGAGCCCGTTAAAA
AGACGGTGACTAAATGAGATTTGCTTTAACCATCATTCGTTGTCAAAGTTTTGAAATGATGGTTATTT
CAATTAAATAAAAGATATGTTACTATAAAAATGTAAAAAGACGACATGCAGTAACATGTCGCCTAATGAGCCCGTTAAAA
AGACGGTGACTAAATGAGATTTGCTTTAACCATCATTCGTTGTCAAAGTTTTGAAATGATGGTTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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