Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 1604178..1604326 Replicon chromosome
Accession NZ_CP019573
Organism Abyssicoccus albus strain S31

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag BVH56_RS09080 Protein ID WP_011276848.1
Coordinates 1604178..1604273 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1604291..1604326 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BVH56_RS08190 1599198..1599845 - 648 WP_000143686.1 type A-8 chloramphenicol O-acetyltransferase -
BVH56_RS08195 1599981..1600565 - 585 Protein_1589 replication initiation factor domain-containing protein -
BVH56_RS08200 1600626..1601300 - 675 WP_053037837.1 IS6 family transposase -
BVH56_RS08205 1601330..1601668 - 339 WP_077140972.1 helix-turn-helix domain-containing protein -
BVH56_RS08210 1603396..1603641 - 246 WP_142351102.1 hypothetical protein -
BVH56_RS09080 1604178..1604273 + 96 WP_011276848.1 type I toxin-antitoxin system Fst family toxin Toxin
- 1604291..1604326 + 36 NuclAT_0 - Antitoxin
BVH56_RS08215 1604553..1605122 - 570 WP_077140973.1 TetR/AcrR family transcriptional regulator -
BVH56_RS08220 1605471..1606415 - 945 WP_002454675.1 ABC transporter substrate-binding protein -
BVH56_RS08225 1606439..1609078 - 2640 WP_002476238.1 MMPL family transporter -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3623.38 Da        Isoelectric Point: 9.5124

>T72679 WP_011276848.1 NZ_CP019573:1604178-1604273 [Abyssicoccus albus]
MLEILVHITTTVISGCIIALFTHWLRNRKDK

Download         Length: 96 bp

>T72679 NZ_CP019573:1604178-1604273 [Abyssicoccus albus]
ATGTTGGAAATCCTTGTTCACATCACGACCACAGTCATCAGTGGTTGTATTATTGCGTTATTTACGCATTGGCTGCGTAA
TCGCAAAGACAAATAG

Antitoxin


Download         Length: 36 bp

>AT72679 NZ_CP019573:1604291-1604326 [Abyssicoccus albus]
TACAAAAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References