Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | txpA-ratA/- |
| Location | 2992437..2992722 | Replicon | chromosome |
| Accession | NZ_CP019512 | ||
| Organism | Enterococcus faecalis strain CLB21560 | ||
Toxin (Protein)
| Gene name | txpA | Uniprot ID | - |
| Locus tag | BZG32_RS15615 | Protein ID | WP_077143780.1 |
| Coordinates | 2992582..2992722 (+) | Length | 47 a.a. |
Antitoxin (RNA)
| Gene name | ratA | ||
| Locus tag | - | ||
| Coordinates | 2992437..2992580 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZG32_RS15585 | 2987589..2988221 | - | 633 | WP_002358972.1 | RloB family protein | - |
| BZG32_RS15590 | 2988230..2989525 | - | 1296 | WP_002396787.1 | AAA family ATPase | - |
| BZG32_RS15600 | 2989987..2991603 | + | 1617 | WP_002358967.1 | phosphatase PAP2/LCP family protein | - |
| BZG32_RS15605 | 2991958..2992080 | + | 123 | WP_002404776.1 | putative holin-like toxin | - |
| BZG32_RS15610 | 2992266..2992463 | + | 198 | WP_002358966.1 | putative holin-like toxin | - |
| - | 2992437..2992580 | - | 144 | - | - | Antitoxin |
| BZG32_RS15615 | 2992582..2992722 | + | 141 | WP_077143780.1 | putative holin-like toxin | Toxin |
| BZG32_RS15620 | 2992953..2993096 | + | 144 | WP_002396786.1 | putative holin-like toxin | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 47 a.a. Molecular weight: 5188.30 Da Isoelectric Point: 10.3265
>T72601 WP_077143780.1 NZ_CP019512:2992582-2992722 [Enterococcus faecalis]
ISLKNTNKNIVYCTAYETIQTILGFGMFTIALIALIVKLLKNDKKK
ISLKNTNKNIVYCTAYETIQTILGFGMFTIALIALIVKLLKNDKKK
Download Length: 141 bp
>T72601 NZ_CP019512:2992582-2992722 [Enterococcus faecalis]
ATTTCTCTGAAAAATACGAATAAAAATATCGTTTACTGTACAGCATATGAAACAATTCAGACGATCCTAGGGTTTGGTAT
GTTTACCATTGCTTTGATTGCGCTGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA
ATTTCTCTGAAAAATACGAATAAAAATATCGTTTACTGTACAGCATATGAAACAATTCAGACGATCCTAGGGTTTGGTAT
GTTTACCATTGCTTTGATTGCGCTGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA
Antitoxin
Download Length: 144 bp
>AT72601 NZ_CP019512:c2992580-2992437 [Enterococcus faecalis]
TGCTACAATAGAGACGAAAAGAGAGGTATGCTCTAACATACCTCTCTAGTGTAGAGCCGTTTAAGACGGTGACCTTTTTA
GTTACAAAAAATAACCGTACTCAGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAA
TGCTACAATAGAGACGAAAAGAGAGGTATGCTCTAACATACCTCTCTAGTGTAGAGCCGTTTAAGACGGTGACCTTTTTA
GTTACAAAAAATAACCGTACTCAGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|