Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2914516..2914776 Replicon chromosome
Accession NZ_CP019512
Organism Enterococcus faecalis strain CLB21560

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag BZG32_RS15230 Protein ID WP_156194032.1
Coordinates 2914633..2914776 (-) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2914516..2914700 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BZG32_RS15215 2910077..2910790 - 714 WP_002354877.1 trehalose operon repressor -
BZG32_RS15220 2911052..2913796 + 2745 WP_002404790.1 glycoside hydrolase family 65 protein -
BZG32_RS15225 2913811..2914461 + 651 WP_002359015.1 beta-phosphoglucomutase -
- 2914516..2914700 + 185 - - Antitoxin
BZG32_RS15230 2914633..2914776 - 144 WP_156194032.1 putative holin-like toxin Toxin
BZG32_RS15235 2915007..2915978 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
BZG32_RS15240 2916153..2916590 - 438 WP_002354871.1 peptide-methionine (R)-S-oxide reductase MsrB -
BZG32_RS15245 2916723..2917277 - 555 WP_002359011.1 septum formation protein Maf -
BZG32_RS15250 2917302..2919434 - 2133 WP_002359010.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5327.50 Da        Isoelectric Point: 10.8331

>T72582 WP_156194032.1 NZ_CP019512:c2914776-2914633 [Enterococcus faecalis]
MSVLPKFTERRGLLSAYETIQTILGFGMFTISLIALIVKLLKNDKKK

Download         Length: 144 bp

>T72582 NZ_CP019512:c2914776-2914633 [Enterococcus faecalis]
ATGAGCGTACTTCCAAAATTTACAGAAAGGAGAGGCCTTTTGTCAGCATATGAAACAATTCAGACGATCCTAGGGTTTGG
TATGTTTACCATTTCTTTGATTGCGCTGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA

Antitoxin


Download         Length: 185 bp

>AT72582 NZ_CP019512:2914516-2914700 [Enterococcus faecalis]
TGCTAGAATGTAGATGAAAAGAGAGAGATGCGTCAACATACCTCTCTGATGTAGAGCCGTTTGAGACGGTGACCAATTGT
ATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAATTTCACAATCAGCGCA
ATCAAAGAAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References