Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 981254..981415 Replicon chromosome
Accession NZ_CP017463
Organism Staphylococcus pasteuri strain JS7

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag BJG87_RS04875 Protein ID WP_107999723.1
Coordinates 981254..981349 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 981381..981415 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BJG87_RS04865 977189..980122 + 2934 WP_096807774.1 AAA family ATPase -
BJG87_RS04870 980122..981063 + 942 WP_017638040.1 3'-5' exoribonuclease YhaM -
BJG87_RS04875 981254..981349 + 96 WP_107999723.1 type I toxin-antitoxin system Fst family toxin Toxin
- 981381..981415 - 35 - - Antitoxin
BJG87_RS04880 981509..982501 - 993 WP_029056284.1 peptidylprolyl isomerase -
BJG87_RS04885 982684..983241 - 558 WP_029056283.1 DUF3267 domain-containing protein -
BJG87_RS04890 983437..983808 - 372 WP_017638293.1 YtxH domain-containing protein -
BJG87_RS04895 983886..984311 - 426 WP_017638294.1 HIT family protein -
BJG87_RS04900 984443..985183 + 741 WP_017638295.1 ABC transporter ATP-binding protein -
BJG87_RS04905 985176..986399 + 1224 WP_096807776.1 ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3656.34 Da        Isoelectric Point: 8.0878

>T66839 WP_107999723.1 NZ_CP017463:981254-981349 [Staphylococcus pasteuri]
MSEIFVHIMTTVISGCIVTLFAHWLRHRNDK

Download         Length: 96 bp

>T66839 NZ_CP017463:981254-981349 [Staphylococcus pasteuri]
ATGTCTGAAATCTTTGTTCATATTATGACTACTGTTATCAGTGGTTGTATTGTTACGTTGTTTGCACATTGGCTACGGCA
TCGTAACGATAAGTAA

Antitoxin


Download         Length: 35 bp

>AT66839 NZ_CP017463:c981415-981381 [Staphylococcus pasteuri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References