Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) yonT-SR6/-
Location 1882183..1882397 Replicon chromosome
Accession NZ_CP016894
Organism Bacillus subtilis strain HJ0-6

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag BSHJ0_RS09535 Protein ID WP_017696861.1
Coordinates 1882183..1882359 (+) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 1882300..1882397 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BSHJ0_RS09520 1877961..1878863 - 903 WP_061891092.1 GIY-YIG nuclease family protein -
BSHJ0_RS09525 1879045..1880922 - 1878 WP_068947522.1 hypothetical protein -
BSHJ0_RS09530 1880962..1881156 - 195 WP_068947523.1 hypothetical protein -
- 1882142..1882242 - 101 NuclAT_0 - -
- 1882142..1882242 - 101 NuclAT_0 - -
- 1882142..1882242 - 101 NuclAT_0 - -
- 1882142..1882242 - 101 NuclAT_0 - -
BSHJ0_RS09535 1882183..1882359 + 177 WP_017696861.1 hypothetical protein Toxin
- 1882300..1882397 - 98 - - Antitoxin
BSHJ0_RS22330 1882413..1882628 + 216 WP_072557198.1 hypothetical protein -
BSHJ0_RS09540 1882673..1882861 + 189 WP_003230987.1 hypothetical protein -
BSHJ0_RS09545 1882943..1884160 + 1218 WP_068947524.1 hypothetical protein -
BSHJ0_RS09550 1884476..1885330 + 855 WP_068947525.1 hypothetical protein -
BSHJ0_RS09555 1885336..1886262 + 927 WP_068947526.1 hypothetical protein -
BSHJ0_RS09560 1886264..1886866 + 603 WP_021493585.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 1814512..2047079 232567


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 59 a.a.        Molecular weight: 6878.45 Da        Isoelectric Point: 12.8833

>T65412 WP_017696861.1 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T65412 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 98 bp

>AT65412 NZ_CP016894:c1882397-1882300 [Bacillus subtilis]
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References