Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 1882183..1882397 | Replicon | chromosome |
Accession | NZ_CP016894 | ||
Organism | Bacillus subtilis strain HJ0-6 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | - |
Locus tag | BSHJ0_RS09535 | Protein ID | WP_017696861.1 |
Coordinates | 1882183..1882359 (+) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 1882300..1882397 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BSHJ0_RS09520 | 1877961..1878863 | - | 903 | WP_061891092.1 | GIY-YIG nuclease family protein | - |
BSHJ0_RS09525 | 1879045..1880922 | - | 1878 | WP_068947522.1 | hypothetical protein | - |
BSHJ0_RS09530 | 1880962..1881156 | - | 195 | WP_068947523.1 | hypothetical protein | - |
- | 1882142..1882242 | - | 101 | NuclAT_0 | - | - |
- | 1882142..1882242 | - | 101 | NuclAT_0 | - | - |
- | 1882142..1882242 | - | 101 | NuclAT_0 | - | - |
- | 1882142..1882242 | - | 101 | NuclAT_0 | - | - |
BSHJ0_RS09535 | 1882183..1882359 | + | 177 | WP_017696861.1 | hypothetical protein | Toxin |
- | 1882300..1882397 | - | 98 | - | - | Antitoxin |
BSHJ0_RS22330 | 1882413..1882628 | + | 216 | WP_072557198.1 | hypothetical protein | - |
BSHJ0_RS09540 | 1882673..1882861 | + | 189 | WP_003230987.1 | hypothetical protein | - |
BSHJ0_RS09545 | 1882943..1884160 | + | 1218 | WP_068947524.1 | hypothetical protein | - |
BSHJ0_RS09550 | 1884476..1885330 | + | 855 | WP_068947525.1 | hypothetical protein | - |
BSHJ0_RS09555 | 1885336..1886262 | + | 927 | WP_068947526.1 | hypothetical protein | - |
BSHJ0_RS09560 | 1886264..1886866 | + | 603 | WP_021493585.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1814512..2047079 | 232567 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6878.45 Da Isoelectric Point: 12.8833
>T65412 WP_017696861.1 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T65412 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 98 bp
>AT65412 NZ_CP016894:c1882397-1882300 [Bacillus subtilis]
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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