Detailed information of TA system TA065408

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 1882142..1882359
• Replicon: chromosome
• Accession: NZ_CP016894
• Organism: Bacillus subtilis strain HJ0-6

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: BSHJ0_RS09535
• Protein ID: WP_017696861.1
• Coordinates: 1882183..1882359 (+)
• Length: 59 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	1882142..1882242 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
BSHJ0_RS09520	1877961..1878863	-	903	WP_061891092.1	GIY-YIG nuclease family protein	-
BSHJ0_RS09525	1879045..1880922	-	1878	WP_068947522.1	hypothetical protein	-
BSHJ0_RS09530	1880962..1881156	-	195	WP_068947523.1	hypothetical protein	-
-	1882142..1882242	-	101	NuclAT_0	-	Antitoxin
-	1882142..1882242	-	101	NuclAT_0	-	Antitoxin
-	1882142..1882242	-	101	NuclAT_0	-	Antitoxin
-	1882142..1882242	-	101	NuclAT_0	-	Antitoxin
BSHJ0_RS09535	1882183..1882359	+	177	WP_017696861.1	hypothetical protein	Toxin
BSHJ0_RS22330	1882413..1882628	+	216	WP_072557198.1	hypothetical protein	-
BSHJ0_RS09540	1882673..1882861	+	189	WP_003230987.1	hypothetical protein	-
BSHJ0_RS09545	1882943..1884160	+	1218	WP_068947524.1	hypothetical protein	-
BSHJ0_RS09550	1884476..1885330	+	855	WP_068947525.1	hypothetical protein	-
BSHJ0_RS09555	1885336..1886262	+	927	WP_068947526.1	hypothetical protein	-
BSHJ0_RS09560	1886264..1886866	+	603	WP_021493585.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	1814512..2047079	232567

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 59 a.a.
• Molecular weight: 6878.45 Da
• Isoelectric Point: 12.8833

>T65408 WP_017696861.1 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Nucleotide

• Length: 177 bp

>T65408 NZ_CP016894:1882183-1882359 [Bacillus subtilis]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin

Nucleotide

• Length: 101 bp

>AT65408 NZ_CP016894:c1882242-1882142 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Structures

Antitoxin