Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 393682..393866 Replicon chromosome
Accession NZ_CP016863
Organism Staphylococcus aureus strain 1625.C01

Toxin (Protein)


Gene name SprA2 Uniprot ID Q2FVI9
Locus tag A7Q05_RS02145 Protein ID WP_000482650.1
Coordinates 393682..393789 (+) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 393806..393866 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A7Q05_RS02120 389044..389517 + 474 WP_000456489.1 GyrI-like domain-containing protein -
A7Q05_RS02125 389640..390851 - 1212 WP_001192075.1 multidrug effflux MFS transporter -
A7Q05_RS02130 391033..391692 - 660 WP_000831298.1 membrane protein -
A7Q05_RS02135 391752..392894 - 1143 WP_001176863.1 glycerate kinase -
A7Q05_RS02140 393162..393548 + 387 WP_000779358.1 flippase GtxA -
A7Q05_RS02145 393682..393789 + 108 WP_000482650.1 type I toxin-antitoxin system Fst family toxin Toxin
- 393806..393866 - 61 - - Antitoxin
A7Q05_RS02155 394417..396180 + 1764 WP_001064838.1 ABC transporter ATP-binding protein/permease -
A7Q05_RS02160 396205..397938 + 1734 WP_000486494.1 ABC transporter ATP-binding protein/permease -
A7Q05_RS02170 398169..398336 + 168 WP_001790576.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)


Sequences

Toxin        


Download         Length: 36 a.a.        Molecular weight: 4011.78 Da        Isoelectric Point: 11.0582

>T65292 WP_000482650.1 NZ_CP016863:393682-393789 [Staphylococcus aureus]
MFNLLINIMTSAISGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T65292 NZ_CP016863:393682-393789 [Staphylococcus aureus]
ATGTTCAATTTATTAATTAACATCATGACTTCAGCTATAAGCGGCTGTCTTGTTGCGTTTTTTGCACATTGGTTACGAAC
GCGCAACAATAAAAAAGGTGACAAATAA

Antitoxin


Download         Length: 61 bp

>AT65292 NZ_CP016863:c393866-393806 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2C9TTS8

Antitoxin

Download structure file

References