62882

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) HipBST/HipA(toxin)
Location 2714369..2715606 Replicon chromosome
Accession NZ_CP015342
Organism Legionella pneumophila strain D-7632

Toxin (Protein)


Gene name HipT Uniprot ID -
Locus tag A5478_RS12115 Protein ID WP_027224428.1
Coordinates 2714674..2715606 (+) Length 311 a.a.

Antitoxin (Protein)


Gene name HipS Uniprot ID -
Locus tag A5478_RS12110 Protein ID WP_027224429.1
Coordinates 2714369..2714677 (+) Length 103 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A5478_RS12085 2710055..2710252 - 198 WP_014842401.1 hypothetical protein -
A5478_RS12090 2710272..2711498 - 1227 WP_027224432.1 MFS transporter -
A5478_RS12095 2712133..2712606 + 474 WP_027224431.1 hypothetical protein -
A5478_RS12100 2712785..2713702 + 918 WP_027224430.1 LysR family transcriptional regulator -
A5478_RS12105 2714145..2714372 + 228 WP_013101792.1 helix-turn-helix transcriptional regulator -
A5478_RS12110 2714369..2714677 + 309 WP_027224429.1 HipA N-terminal domain-containing protein Antitoxin
A5478_RS12115 2714674..2715606 + 933 WP_027224428.1 HipA domain-containing protein Toxin
A5478_RS12120 2715735..2718302 + 2568 WP_027224427.1 magnesium-translocating P-type ATPase -
A5478_RS12125 2718337..2719281 + 945 WP_027224426.1 flippase-like domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(53-279)

Antitoxin

HipA, N-terminal subdomain 1

(5-98)


Sequences

Toxin        


Download         Length: 311 a.a.        Molecular weight: 35780.41 Da        Isoelectric Point: 9.5904

>T62882 WP_027224428.1 NZ_CP015342:2714674-2715606 [Legionella pneumophila]
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQKKLSAKLKIKEGSFEIVDQNG
HYILKPQSDIYPELPENEAITMTLAKTIGLEVPVHGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKS
SMEKVIAIIEQFCTFPKIEFVKLFKLTLFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNSTIAQKNTKEEIALPLKG
KKNNLTKSDFLNYFAVEKLGLNQNVINGIAQEFHQAIPEWRELISFSFLSQPMQEKYLQLLDQRCKRLNF

Download         Length: 933 bp

>T62882 NZ_CP015342:2714674-2715606 [Legionella pneumophila]
ATGAAACGCTGCCCGATTACTTATGAAAAAATCAGTGACCAAGAAAACTATTCACAACGTGGATTGCGCTTGCTTTCTCC
TCAATTAAAAAACCTGAGCCCATTAGATTTAAGTGCTGATGAGCAGCGTCAGGAAGCAATTGCTCGAGTAGGAAAGATGT
CTATTCAAGGTGTCCAAAAGAAACTAAGCGCAAAACTAAAGATTAAAGAGGGATCTTTTGAAATCGTGGATCAAAATGGT
CACTATATTTTAAAACCACAAAGTGATATTTATCCAGAATTGCCGGAAAACGAAGCCATTACCATGACCCTTGCAAAGAC
CATTGGCCTTGAAGTGCCTGTTCATGGTTTAGTGTACTCTAAAGATAACAGTTTGACTTACTTCATTAAACGGTTTGATA
GAATAGGCCATAATAAAAAATTAGCTTTAGAAGATTTTGCACAGCTATCGGGTGAAGATCGACATACAAAATATAAAAGT
TCTATGGAAAAAGTGATTGCAATCATAGAGCAGTTTTGCACGTTCCCCAAAATTGAATTCGTGAAATTATTTAAGTTGAC
ATTGTTTAACTTCCTGGTCGGCAATGAAGACATGCACCTAAAAAATTTTTCTCTAATTACTAGGGATAGAAAAATTTCCA
TATCACCAGCATACGATTTACTTAACTCAACTATCGCTCAAAAAAACACAAAAGAAGAAATCGCATTGCCCCTCAAAGGG
AAAAAAAATAATTTAACAAAGAGTGATTTTCTTAACTATTTTGCCGTTGAGAAATTAGGATTAAATCAGAACGTCATCAA
TGGGATCGCACAAGAGTTTCATCAGGCAATACCAGAATGGCGAGAGTTGATTAGTTTCAGTTTTTTATCTCAACCGATGC
AGGAAAAATATCTCCAATTGCTCGATCAACGATGCAAGAGATTAAATTTTTGA

Antitoxin


Download         Length: 103 a.a.        Molecular weight: 11586.38 Da        Isoelectric Point: 4.5859

>AT62882 WP_027224429.1 NZ_CP015342:2714369-2714677 [Legionella pneumophila]
MRKAYVSVNGIKAGILEELQSGKYQFSYFDDYHGAPVSLTMPLTNKVYDFDVFPPFFEGLLPEGIMLEALLRKYKIDKND
YFGQLIIVGQDVVGAVTIEEIR

Download         Length: 309 bp

>AT62882 NZ_CP015342:2714369-2714677 [Legionella pneumophila]
ATGAGAAAAGCATACGTATCAGTGAATGGCATCAAGGCTGGAATATTAGAAGAATTACAAAGCGGAAAATATCAATTCAG
TTACTTTGATGATTATCACGGGGCACCTGTTTCTCTCACAATGCCGTTAACCAATAAGGTCTATGATTTTGATGTATTTC
CCCCTTTTTTTGAAGGGTTACTTCCTGAAGGCATTATGCTTGAAGCACTATTACGCAAATATAAAATCGATAAAAATGAT
TATTTTGGCCAATTGATAATAGTTGGCCAGGATGTCGTAGGCGCAGTGACTATTGAGGAAATAAGATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References