Detailed information of TA system TA057947

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): sprG-sprF/-
• Location: 1786221..1786480
• Replicon: chromosome
• Accession: NZ_CP013114
• Organism: Staphylococcus equorum strain KS1039

Toxin (Protein)

• Gene name: SprG2
• Uniprot ID: -
• Locus tag: SE1039_RS13600
• Protein ID: WP_002511402.1
• Coordinates: 1786373..1786480 (-)
• Length: 36 a.a.

Antitoxin (RNA)

Gene name	SprF1
Locus tag	-
Coordinates	1786221..1786383 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
SE1039_RS08680	1781710..1782747	-	1038	WP_056935773.1	lactonase family protein	-
SE1039_RS08685	1782924..1783334	+	411	WP_002507169.1	YolD-like family protein	-
SE1039_RS13780	1783902..1784072	-	171	WP_002507168.1	hypothetical protein	-
SE1039_RS08690	1784567..1785607	+	1041	WP_056935774.1	choloylglycine hydrolase	-
SE1039_RS13785	1785915..1786085	+	171	WP_002507166.1	tyrosine-type recombinase/integrase	-
-	1786221..1786383	+	163	-	-	Antitoxin
SE1039_RS13600	1786373..1786480	-	108	WP_002511402.1	putative holin-like toxin	Toxin
SE1039_RS08695	1786846..1787697	-	852	WP_021339982.1	DUF4097 family beta strand repeat protein	-
SE1039_RS08700	1787694..1788254	-	561	WP_002511403.1	DUF1700 domain-containing protein	-
SE1039_RS13900	1788626..1788787	-	162	WP_196368299.1	hypothetical protein	-
SE1039_RS08710	1789003..1789563	+	561	WP_002507158.1	thioredoxin family protein	-
SE1039_RS08715	1789646..1790374	-	729	WP_002507157.1	ABC transporter permease subunit	-
SE1039_RS08720	1790374..1791246	-	873	WP_002507156.1	ABC transporter ATP-binding protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (4-35)

Sequences

Toxin

Protein

• Length: 36 a.a.
• Molecular weight: 3756.72 Da
• Isoelectric Point: 10.4997

>T57947 WP_002511402.1 NZ_CP013114:c1786480-1786373 [Staphylococcus equorum]
VVPIVEALHLMLGFGTFIVTLLGLVVAIVKLSHKK

Nucleotide

• Length: 108 bp

>T57947 NZ_CP013114:c1786480-1786373 [Staphylococcus equorum]
GTGGTTCCAATTGTAGAAGCACTACACTTAATGTTAGGTTTCGGTACTTTCATCGTTACCTTATTAGGTTTAGTGGTTGC
AATTGTTAAATTAAGCCATAAAAAATAA

Antitoxin

Nucleotide

• Length: 163 bp

>AT57947 NZ_CP013114:1786221-1786383 [Staphylococcus equorum]
ATTTGATAATATTTTTATGTTGTGGTAATTTATATATAGAAAAAGGGCAACACACCATAAGTGCATCGCCCTAATGAGCC
CGTTAAAAAGACGGTGGCTGGAATTTAATAATGATTAAATAATCATCTCATCCTCGCCAAAGTTAGAGATGGTTATTTTT
TAT

Structures

Antitoxin