Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | TMCS/- |
Location | 1601937..1602516 | Replicon | chromosome |
Accession | NZ_CP009554 | ||
Organism | Staphylococcus aureus strain FORC_001 |
Toxin (Protein)
Gene name | MW1434 | Uniprot ID | A0A4P7P609 |
Locus tag | FORC1_RS07780 | Protein ID | WP_001025401.1 |
Coordinates | 1602271..1602516 (-) | Length | 82 a.a. |
Antitoxin (RNA)
Gene name | MW1433 | ||
Locus tag | - | ||
Coordinates | 1601937..1602302 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FORC1_RS07740 | 1598680..1599237 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
FORC1_RS07745 | 1599263..1600429 | - | 1167 | WP_000762530.1 | DUF2800 domain-containing protein | - |
FORC1_RS07750 | 1600426..1600788 | - | 363 | WP_000985972.1 | hypothetical protein | - |
FORC1_RS07755 | 1600803..1601126 | - | 324 | WP_000174998.1 | hypothetical protein | - |
FORC1_RS07760 | 1601205..1601366 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
FORC1_RS07765 | 1601379..1601642 | - | 264 | WP_001124157.1 | helix-turn-helix domain-containing protein | - |
FORC1_RS07770 | 1601667..1601882 | - | 216 | WP_001097552.1 | hypothetical protein | - |
FORC1_RS07775 | 1601937..1602302 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin |
FORC1_RS07780 | 1602271..1602516 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin |
FORC1_RS07785 | 1602583..1602963 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
FORC1_RS07790 | 1602950..1603147 | - | 198 | WP_001148860.1 | hypothetical protein | - |
FORC1_RS07795 | 1603217..1603429 | + | 213 | WP_000362644.1 | hypothetical protein | - |
FORC1_RS15695 | 1603470..1603619 | - | 150 | WP_000771849.1 | hypothetical protein | - |
FORC1_RS07800 | 1603634..1604077 | - | 444 | WP_000435360.1 | hypothetical protein | - |
FORC1_RS07805 | 1604125..1604337 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
FORC1_RS07810 | 1604489..1605220 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
FORC1_RS07815 | 1605291..1605473 | + | 183 | WP_000705240.1 | hypothetical protein | - |
FORC1_RS07820 | 1605510..1605656 | + | 147 | WP_001013104.1 | hypothetical protein | - |
FORC1_RS07825 | 1605653..1606267 | - | 615 | WP_000191466.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1563460..1620372 | 56912 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9468.72 Da Isoelectric Point: 5.7783
>T49264 WP_001025401.1 NZ_CP009554:c1602516-1602271 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
Download Length: 246 bp
>T49264 NZ_CP009554:c1602516-1602271 [Staphylococcus aureus]
ATGAACATTCAAGAAGCAACTAAGATAGCTACAAAAAATCTTGTCTCTATGACACGGAAAGATTGGAAAGAAAGTCATCG
AACTAAGATATTACCAACAAATGATAGTTTTTTACAATGCATCATTTCAAATAGCGATGGGACAAACCTTATCAGATATT
GGCAACCTTCAGCCGATGACCTCATGGCAAATGATTGGGAAGTTATAAACCCAACTAGAGACCAGGAATTATTGAAGCAA
TTTTAG
ATGAACATTCAAGAAGCAACTAAGATAGCTACAAAAAATCTTGTCTCTATGACACGGAAAGATTGGAAAGAAAGTCATCG
AACTAAGATATTACCAACAAATGATAGTTTTTTACAATGCATCATTTCAAATAGCGATGGGACAAACCTTATCAGATATT
GGCAACCTTCAGCCGATGACCTCATGGCAAATGATTGGGAAGTTATAAACCCAACTAGAGACCAGGAATTATTGAAGCAA
TTTTAG
Antitoxin
Download Length: 366 bp
>AT49264 NZ_CP009554:1601937-1602302 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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