Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 2234247..2234464 Replicon chromosome
Accession NZ_CP007672
Organism Staphylococcus aureus strain CA12

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag EQ80_RS11415 Protein ID WP_001802298.1
Coordinates 2234360..2234464 (-) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF4
Locus tag -
Coordinates 2234247..2234302 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EQ80_RS11395 2230384..2231049 - 666 WP_001024094.1 SDR family oxidoreductase -
EQ80_RS11400 2231201..2231521 + 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
EQ80_RS11405 2231523..2232503 + 981 WP_000019744.1 CDF family zinc efflux transporter CzrB -
EQ80_RS11410 2232769..2233860 + 1092 WP_000495671.1 lytic regulatory protein -
- 2234247..2234302 + 56 - - Antitoxin
EQ80_RS11415 2234360..2234464 - 105 WP_001802298.1 hypothetical protein Toxin
EQ80_RS15495 2234625..2235108 - 484 Protein_2158 recombinase family protein -
EQ80_RS11425 2235151..2236287 - 1137 WP_000115564.1 SAP domain-containing protein -
EQ80_RS11430 2236576..2236668 + 93 WP_001790138.1 hypothetical protein -
EQ80_RS11435 2237373..2238230 - 858 WP_000370924.1 Cof-type HAD-IIB family hydrolase -
EQ80_RS11440 2238298..2239080 - 783 WP_000908176.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T46849 WP_001802298.1 NZ_CP007672:c2234464-2234360 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

>T46849 NZ_CP007672:c2234464-2234360 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTTATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA

Antitoxin


Download         Length: 56 bp

>AT46849 NZ_CP007672:2234247-2234302 [Staphylococcus aureus]
AAAAAGGGCAACACTCGGAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9

Antitoxin

Download structure file

References