Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) txpA-ratA/-
Location 745608..745849 Replicon chromosome
Accession NZ_AP027297
Organism Enterococcus faecalis strain L6D

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag QUD71_RS03590 Protein ID WP_286328474.1
Coordinates 745608..745745 (+) Length 46 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 745654..745849 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(5-36)


Sequences

Toxin        


Download         Length: 46 a.a.        Molecular weight: 5080.05 Da        Isoelectric Point: 6.0403

>T43714 WP_286328474.1 NZ_AP027297:745608-745745 [Enterococcus faecalis]
IVYCTTYETIQTILGFGMFTIALIALIVKLLKEDNRNDRCLTLAS

Download         Length: 138 bp

>T43714 NZ_AP027297:745608-745745 [Enterococcus faecalis]
ATCGTTTATTGTACAACATATGAAACAATTCAGACGATCCTTGGGTTTGGTATGTTTACCATTGCTTTGATTGCACTGAT
TGTGAAATTGCTTAAAGAAGACAACAGAAATGACCGCTGTTTAACTTTGGCTAGTTAG

Antitoxin


Download         Length: 196 bp

>AT43714 NZ_AP027297:c745849-745654 [Enterococcus faecalis]
TGTGCTGCAATAGAAACGAAAAGAGAGGTATGCTTCCAACATAGCTCTCTAATGTAGAACCGTTACTAACGGTGACAAAA
TTTTAAAGATTTTGAAATGACCGTCTAACTAGCCAAAGTTAAACAGCGGTCATTTCTGTTGTCTTCTTTAAGCAATTTCA
CAATCAGTGCAATCAAAGCAATGGTAAACATACCAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References