Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 2146568..2146842 Replicon chromosome
Accession NZ_AP024201
Organism Staphylococcus argenteus strain Tokyo13069

Toxin (Protein)


Gene name SprG3 Uniprot ID -
Locus tag JN167_RS10305 Protein ID WP_047528424.1
Coordinates 2146711..2146842 (-) Length 44 a.a.

Antitoxin (RNA)


Gene name SprF3
Locus tag -
Coordinates 2146568..2146744 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JN167_RS10285 2142703..2143368 - 666 WP_001024087.1 SDR family oxidoreductase -
JN167_RS10290 2143519..2143839 + 321 WP_000003754.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
JN167_RS10295 2143841..2144821 + 981 WP_000019747.1 CDF family zinc efflux transporter CzrB -
JN167_RS10300 2145082..2146173 + 1092 WP_047528425.1 hypothetical protein -
- 2146568..2146744 + 177 - - Antitoxin
JN167_RS10305 2146711..2146842 - 132 WP_047528424.1 hypothetical protein Toxin
JN167_RS10310 2146888..2147501 - 614 Protein_1988 recombinase family protein -
JN167_RS10315 2147544..2148674 - 1131 WP_047528423.1 SAP domain-containing protein -
JN167_RS10320 2149734..2150591 - 858 WP_047528422.1 Cof-type HAD-IIB family hydrolase -
JN167_RS10325 2150659..2151441 - 783 WP_047528421.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin SymE-like

(20-71)


Sequences

Toxin        


Download         Length: 44 a.a.        Molecular weight: 5142.15 Da        Isoelectric Point: 5.6102

>T38129 WP_047528424.1 NZ_AP024201:c2146842-2146711 [Staphylococcus argenteus]
MLLLERISMSDFEILIVVLTIIGLVLISNQDQKITFYRFDRHF

Download         Length: 132 bp

>T38129 NZ_AP024201:c2146842-2146711 [Staphylococcus argenteus]
TTGTTACTCCTAGAAAGGATTAGTATGTCTGATTTTGAAATACTGATAGTTGTATTAACAATTATTGGTTTAGTATTGAT
CAGTAATCAAGACCAAAAAATAACCTTCTATCGCTTTGACCGGCATTTTTGA

Antitoxin


Download         Length: 177 bp

>AT38129 NZ_AP024201:2146568-2146744 [Staphylococcus argenteus]
GTTAAAATATATTTGTAGTAAGTAGAAGCAAAAGGTGAAAATCTTTATCTCTTGCAACACAAAAAAGGCAACACTCGGAA
ACATGTTAGCCTAATGAGCCCATTAAAAAGACAGTGACCTTTTATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTCAA
AGCGATAGAAGGTTATT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References