Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 2437296..2437480 Replicon chromosome
Accession NZ_AP024200
Organism Staphylococcus argenteus strain Tokyo13064

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag JN157_RS11765 Protein ID WP_047527328.1
Coordinates 2437373..2437480 (-) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 2437296..2437356 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JN157_RS11755 2433150..2434883 - 1734 WP_047431349.1 ABC transporter ATP-binding protein/permease -
JN157_RS11760 2434908..2436671 - 1764 WP_202290026.1 ABC transporter ATP-binding protein/permease -
- 2437296..2437356 + 61 - - Antitoxin
JN157_RS11765 2437373..2437480 - 108 WP_047527328.1 type I toxin-antitoxin system Fst family toxin Toxin
JN157_RS11770 2437615..2438001 - 387 WP_047527330.1 flippase GtxA -
JN157_RS11775 2438268..2439410 + 1143 WP_047527332.1 glycerate kinase -
JN157_RS11780 2439469..2440128 + 660 WP_000831306.1 membrane protein -
JN157_RS11785 2440313..2441524 + 1212 WP_047527334.1 multidrug effflux MFS transporter -
JN157_RS11790 2441640..2442119 - 480 WP_047527336.1 GyrI-like domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 36 a.a.        Molecular weight: 4012.76 Da        Isoelectric Point: 10.4935

>T38118 WP_047527328.1 NZ_AP024200:c2437480-2437373 [Staphylococcus argenteus]
MFNLLIDIMTSAISGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T38118 NZ_AP024200:c2437480-2437373 [Staphylococcus argenteus]
ATGTTCAATTTATTAATTGACATCATGACTTCAGCTATAAGCGGCTGTCTTGTTGCGTTTTTTGCACATTGGTTACGAAC
GCGCAACAATAAAAAAGGTGACAAATAA

Antitoxin


Download         Length: 61 bp

>AT38118 NZ_AP024200:2437296-2437356 [Staphylococcus argenteus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References