Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | higBA (relBE)/- |
Location | 1924139..1924695 | Replicon | chromosome |
Accession | NZ_AP022347 | ||
Organism | Fluviibacter phosphoraccumulans strain ICHIJ1 |
Toxin (Protein)
Gene name | higB | Uniprot ID | - |
Locus tag | ICHIJ1_RS12205 | Protein ID | WP_202930750.1 |
Coordinates | 1924513..1924695 (-) | Length | 61 a.a. |
Antitoxin (Protein)
Gene name | higA | Uniprot ID | - |
Locus tag | ICHIJ1_RS09670 | Protein ID | WP_162050402.1 |
Coordinates | 1924139..1924453 (-) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ICHIJ1_RS09650 | 1919289..1920434 | + | 1146 | WP_162050398.1 | transglutaminase-like domain-containing protein | - |
ICHIJ1_RS09655 | 1920454..1920834 | + | 381 | WP_162050399.1 | hypothetical protein | - |
ICHIJ1_RS09660 | 1920988..1921587 | + | 600 | WP_162050400.1 | hypothetical protein | - |
ICHIJ1_RS09665 | 1921613..1924075 | - | 2463 | WP_162050401.1 | replicative DNA helicase | - |
ICHIJ1_RS09670 | 1924139..1924453 | - | 315 | WP_162050402.1 | transcriptional regulator | Antitoxin |
ICHIJ1_RS12205 | 1924513..1924695 | - | 183 | WP_202930750.1 | hypothetical protein | Toxin |
ICHIJ1_RS09680 | 1924882..1925331 | - | 450 | WP_162050403.1 | 50S ribosomal protein L9 | - |
ICHIJ1_RS09685 | 1925337..1925624 | - | 288 | WP_162050404.1 | 30S ribosomal protein S18 | - |
ICHIJ1_RS09690 | 1925646..1925942 | - | 297 | WP_162050975.1 | primosomal replication protein N | - |
ICHIJ1_RS09695 | 1925974..1926330 | - | 357 | WP_162050405.1 | 30S ribosomal protein S6 | - |
ICHIJ1_RS09700 | 1926417..1927370 | - | 954 | WP_162050406.1 | CysB family HTH-type transcriptional regulator | - |
ICHIJ1_RS09705 | 1927486..1928259 | + | 774 | WP_162050976.1 | sulfite exporter TauE/SafE family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 61 a.a. Molecular weight: 6815.79 Da Isoelectric Point: 9.5057
>T35407 WP_202930750.1 NZ_AP022347:c1924695-1924513 [Fluviibacter phosphoraccumulans]
MATPEAGDVIEGTGGLRKLRYADATRGKGKRGGLRVIYYWWVSGAQFWLFTLYNKDEMVD
MATPEAGDVIEGTGGLRKLRYADATRGKGKRGGLRVIYYWWVSGAQFWLFTLYNKDEMVD
Download Length: 183 bp
>T35407 NZ_AP022347:c1924695-1924513 [Fluviibacter phosphoraccumulans]
ATGGCTACGCCAGAAGCCGGTGATGTCATTGAAGGCACTGGCGGTCTTAGAAAGCTAAGGTATGCCGATGCGACTAGAGG
AAAAGGTAAGCGTGGCGGTCTGAGAGTAATTTACTACTGGTGGGTGTCTGGTGCGCAGTTCTGGCTATTTACGCTGTACA
ACAAAGATGAAATGGTGGATTGA
ATGGCTACGCCAGAAGCCGGTGATGTCATTGAAGGCACTGGCGGTCTTAGAAAGCTAAGGTATGCCGATGCGACTAGAGG
AAAAGGTAAGCGTGGCGGTCTGAGAGTAATTTACTACTGGTGGGTGTCTGGTGCGCAGTTCTGGCTATTTACGCTGTACA
ACAAAGATGAAATGGTGGATTGA
Antitoxin
Download Length: 105 a.a. Molecular weight: 11900.80 Da Isoelectric Point: 10.9823
>AT35407 WP_162050402.1 NZ_AP022347:c1924453-1924139 [Fluviibacter phosphoraccumulans]
MTKRNMFAELVEGFEALAEHREGKRTLRTHKVAAKAIDAIAPDELVRLRERLHLSRPVFATCLRTNPRTLENWEQGRAKP
NAQATVLIRLVEKFPDTVQRLASV
MTKRNMFAELVEGFEALAEHREGKRTLRTHKVAAKAIDAIAPDELVRLRERLHLSRPVFATCLRTNPRTLENWEQGRAKP
NAQATVLIRLVEKFPDTVQRLASV
Download Length: 315 bp
>AT35407 NZ_AP022347:c1924453-1924139 [Fluviibacter phosphoraccumulans]
ATGACCAAAAGAAATATGTTTGCAGAGTTGGTAGAGGGGTTTGAAGCCTTGGCTGAGCACCGGGAGGGGAAGCGTACGCT
GCGAACCCATAAGGTTGCTGCAAAAGCGATCGACGCAATTGCGCCGGATGAGCTCGTGCGTCTTAGAGAACGTTTGCACT
TATCCCGTCCGGTTTTTGCCACCTGCTTGAGGACGAATCCCAGAACTTTGGAGAATTGGGAGCAAGGGCGGGCAAAGCCG
AATGCGCAGGCGACGGTGTTGATCCGTTTGGTCGAAAAGTTTCCTGATACGGTTCAGCGACTGGCATCGGTCTAA
ATGACCAAAAGAAATATGTTTGCAGAGTTGGTAGAGGGGTTTGAAGCCTTGGCTGAGCACCGGGAGGGGAAGCGTACGCT
GCGAACCCATAAGGTTGCTGCAAAAGCGATCGACGCAATTGCGCCGGATGAGCTCGTGCGTCTTAGAGAACGTTTGCACT
TATCCCGTCCGGTTTTTGCCACCTGCTTGAGGACGAATCCCAGAACTTTGGAGAATTGGGAGCAAGGGCGGGCAAAGCCG
AATGCGCAGGCGACGGTGTTGATCCGTTTGGTCGAAAAGTTTCCTGATACGGTTCAGCGACTGGCATCGGTCTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|
Antitoxin
Source | ID | Structure |
---|