Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | higBA (relBE)/COG4683-HTH_37 |
Location | 3123374..3124034 | Replicon | chromosome |
Accession | NZ_AP022274 | ||
Organism | Enterobacter cloacae strain WP8-W19-CRE-02 |
Toxin (Protein)
Gene name | higB | Uniprot ID | - |
Locus tag | H7R70_RS15245 | Protein ID | WP_182945658.1 |
Coordinates | 3123681..3124034 (-) | Length | 118 a.a. |
Antitoxin (Protein)
Gene name | higA | Uniprot ID | - |
Locus tag | H7R70_RS15240 | Protein ID | WP_182945657.1 |
Coordinates | 3123374..3123676 (-) | Length | 101 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
H7R70_RS15220 | 3118410..3119735 | + | 1326 | WP_100165963.1 | SidA/IucD/PvdA family monooxygenase | - |
H7R70_RS15225 | 3119762..3121951 | + | 2190 | WP_100165962.1 | TonB-dependent siderophore receptor | - |
H7R70_RS15235 | 3122286..3123245 | - | 960 | Protein_2984 | zinc-binding alcohol dehydrogenase family protein | - |
H7R70_RS15240 | 3123374..3123676 | - | 303 | WP_182945657.1 | XRE family transcriptional regulator | Antitoxin |
H7R70_RS15245 | 3123681..3124034 | - | 354 | WP_182945658.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
H7R70_RS15250 | 3124273..3125223 | - | 951 | WP_010432106.1 | HTH-type transcriptional regulator Cbl | - |
H7R70_RS15255 | 3125320..3126237 | - | 918 | WP_010432103.1 | nitrogen assimilation transcriptional regulator NAC | - |
H7R70_RS15265 | 3126778..3127674 | - | 897 | WP_182945659.1 | L,D-transpeptidase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 118 a.a. Molecular weight: 13623.53 Da Isoelectric Point: 9.5698
>T35176 WP_182945658.1 NZ_AP022274:c3124034-3123681 [Enterobacter cloacae]
VWTINTTDRFDRWFTSLDDTDRASVLAAMLVLREKGPGLSRPYADTLKGSRHSNMKELRIQSKGDPLRAFFAFDPNRTGI
MLCAGNKVGSERRFYDEMLLVADREFTYWLNKLKERE
VWTINTTDRFDRWFTSLDDTDRASVLAAMLVLREKGPGLSRPYADTLKGSRHSNMKELRIQSKGDPLRAFFAFDPNRTGI
MLCAGNKVGSERRFYDEMLLVADREFTYWLNKLKERE
Download Length: 354 bp
>T35176 NZ_AP022274:c3124034-3123681 [Enterobacter cloacae]
GTGTGGACAATTAATACGACGGATAGGTTTGATCGCTGGTTCACTTCGCTTGACGATACCGATCGCGCCAGCGTACTTGC
AGCAATGCTTGTTTTGCGAGAGAAGGGGCCGGGTTTATCGAGACCCTACGCTGATACGCTTAAAGGCTCTCGTCACAGCA
ACATGAAAGAGCTACGTATTCAGAGTAAGGGGGATCCATTGCGGGCGTTTTTCGCATTTGACCCAAACCGTACCGGCATC
ATGCTTTGTGCTGGCAATAAGGTCGGCAGTGAAAGGCGATTCTACGATGAGATGCTTCTCGTTGCTGACCGGGAATTCAC
TTACTGGCTGAATAAATTAAAAGAGAGGGAATAG
GTGTGGACAATTAATACGACGGATAGGTTTGATCGCTGGTTCACTTCGCTTGACGATACCGATCGCGCCAGCGTACTTGC
AGCAATGCTTGTTTTGCGAGAGAAGGGGCCGGGTTTATCGAGACCCTACGCTGATACGCTTAAAGGCTCTCGTCACAGCA
ACATGAAAGAGCTACGTATTCAGAGTAAGGGGGATCCATTGCGGGCGTTTTTCGCATTTGACCCAAACCGTACCGGCATC
ATGCTTTGTGCTGGCAATAAGGTCGGCAGTGAAAGGCGATTCTACGATGAGATGCTTCTCGTTGCTGACCGGGAATTCAC
TTACTGGCTGAATAAATTAAAAGAGAGGGAATAG
Antitoxin
Download Length: 101 a.a. Molecular weight: 11059.84 Da Isoelectric Point: 6.2298
>AT35176 WP_182945657.1 NZ_AP022274:c3123676-3123374 [Enterobacter cloacae]
MGRTLEQLIADEKPEVVASAQAIATDILLNIHLAELREKVHKTQVEMAQALGIRQPTVAVMEKPGRDLKLSSLKRYVEAA
GGKLRLDVELPDGSHYEFVL
MGRTLEQLIADEKPEVVASAQAIATDILLNIHLAELREKVHKTQVEMAQALGIRQPTVAVMEKPGRDLKLSSLKRYVEAA
GGKLRLDVELPDGSHYEFVL
Download Length: 303 bp
>AT35176 NZ_AP022274:c3123676-3123374 [Enterobacter cloacae]
ATGGGAAGAACCCTTGAGCAGCTTATAGCGGATGAAAAGCCGGAGGTTGTCGCCAGCGCTCAGGCGATAGCAACGGATAT
TTTGCTCAACATTCATCTGGCTGAGTTACGTGAGAAAGTACATAAAACCCAAGTAGAGATGGCACAGGCTCTGGGTATCA
GGCAGCCTACCGTTGCGGTAATGGAAAAGCCCGGGCGCGATTTGAAACTTTCTTCACTTAAACGTTACGTTGAGGCTGCG
GGCGGAAAGCTGCGGCTTGATGTTGAACTGCCAGATGGCTCGCATTATGAGTTTGTGCTGTAG
ATGGGAAGAACCCTTGAGCAGCTTATAGCGGATGAAAAGCCGGAGGTTGTCGCCAGCGCTCAGGCGATAGCAACGGATAT
TTTGCTCAACATTCATCTGGCTGAGTTACGTGAGAAAGTACATAAAACCCAAGTAGAGATGGCACAGGCTCTGGGTATCA
GGCAGCCTACCGTTGCGGTAATGGAAAAGCCCGGGCGCGATTTGAAACTTTCTTCACTTAAACGTTACGTTGAGGCTGCG
GGCGGAAAGCTGCGGCTTGATGTTGAACTGCCAGATGGCTCGCATTATGAGTTTGTGCTGTAG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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