Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprA1-SprA2AS/-
Location 2554381..2554539 Replicon chromosome
Accession NZ_AP019698
Organism Staphylococcus arlettae strain P2

Toxin (Protein)


Gene name sprA1 Uniprot ID -
Locus tag SAP2_RS12345 Protein ID WP_107373825.1
Coordinates 2554444..2554539 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 2554381..2554417 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SAP2_RS12310 2549891..2550451 - 561 WP_142020016.1 TIGR00730 family Rossman fold protein -
SAP2_RS12315 2550453..2550980 - 528 WP_142020018.1 DNA topology modulation protein -
SAP2_RS12320 2551141..2551683 + 543 WP_107376750.1 GNAT family N-acetyltransferase -
SAP2_RS12325 2552078..2552491 + 414 WP_100218103.1 LytTR family transcriptional regulator -
SAP2_RS12330 2552488..2552946 + 459 WP_142020020.1 DUF3021 domain-containing protein -
SAP2_RS12335 2552952..2553410 + 459 WP_142020022.1 DUF4188 domain-containing protein -
SAP2_RS12340 2553936..2554277 + 342 WP_172604834.1 hypothetical protein -
- 2554381..2554417 + 37 - - Antitoxin
SAP2_RS12345 2554444..2554539 - 96 WP_107373825.1 type I toxin-antitoxin system Fst family toxin Toxin
SAP2_RS12350 2554874..2555287 + 414 WP_142020024.1 hypothetical protein -
SAP2_RS12355 2555303..2555536 + 234 WP_142020026.1 NYN domain-containing protein -
SAP2_RS12360 2555592..2555834 - 243 WP_002464877.1 30S ribosomal protein S18 -
SAP2_RS12365 2556108..2556803 - 696 WP_002509646.1 thioesterase II family protein -
SAP2_RS12370 2556816..2557448 - 633 WP_002509647.1 4'-phosphopantetheinyl transferase superfamily protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3537.27 Da        Isoelectric Point: 9.9256

>T32909 WP_107373825.1 NZ_AP019698:c2554539-2554444 [Staphylococcus arlettae]
VILIFVHIIGPVISGCAIAYFTYWLSKRNKN

Download         Length: 96 bp

>T32909 NZ_AP019698:c2554539-2554444 [Staphylococcus arlettae]
GTGATACTTATTTTCGTTCACATCATAGGGCCAGTCATTAGTGGCTGTGCCATCGCGTACTTTACTTATTGGCTAAGTAA
ACGCAATAAAAACTAG

Antitoxin


Download         Length: 37 bp

>AT32909 NZ_AP019698:2554381-2554417 [Staphylococcus arlettae]
ATACACCAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References