Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | TMCS/- |
| Location | 1640274..1640853 | Replicon | chromosome |
| Accession | NZ_AP018349 | ||
| Organism | Staphylococcus aureus strain GN1 | ||
Toxin (Protein)
| Gene name | MW1434 | Uniprot ID | A0A4P7P609 |
| Locus tag | D8S83_RS08110 | Protein ID | WP_001025401.1 |
| Coordinates | 1640608..1640853 (-) | Length | 82 a.a. |
Antitoxin (RNA)
| Gene name | MW1433 | ||
| Locus tag | - | ||
| Coordinates | 1640274..1640639 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8S83_RS08070 | 1637018..1637575 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| D8S83_RS08075 | 1637601..1638767 | - | 1167 | WP_000762530.1 | DUF2800 domain-containing protein | - |
| D8S83_RS08080 | 1638764..1639126 | - | 363 | WP_000985972.1 | hypothetical protein | - |
| D8S83_RS08085 | 1639141..1639464 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| D8S83_RS08090 | 1639543..1639704 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| D8S83_RS08095 | 1639716..1639979 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| D8S83_RS08100 | 1640004..1640219 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| D8S83_RS08105 | 1640274..1640639 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin |
| D8S83_RS08110 | 1640608..1640853 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin |
| D8S83_RS08115 | 1640903..1641121 | - | 219 | WP_001001383.1 | hypothetical protein | - |
| D8S83_RS08120 | 1641137..1641692 | - | 556 | Protein_1526 | phage antirepressor KilAC domain-containing protein | - |
| D8S83_RS08125 | 1641718..1641945 | - | 228 | WP_001030311.1 | hypothetical protein | - |
| D8S83_RS08130 | 1642117..1642731 | + | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| D8S83_RS08135 | 1642747..1643667 | + | 921 | WP_000348133.1 | 3'-5' exoribonuclease | - |
| D8S83_RS08140 | 1643763..1643945 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| D8S83_RS08145 | 1644090..1644713 | - | 624 | WP_001166482.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | lukF-PV / lukS-PV | 1596957..1663657 | 66700 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9468.72 Da Isoelectric Point: 5.7783
>T31751 WP_001025401.1 NZ_AP018349:c1640853-1640608 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
Download Length: 246 bp
>T31751 NZ_AP018349:c1640853-1640608 [Staphylococcus aureus]
ATGAACATTCAAGAAGCAACTAAGATAGCTACAAAAAATCTTGTCTCTATGACACGGAAAGATTGGAAAGAAAGTCATCG
AACTAAGATATTACCAACAAATGATAGTTTTTTACAATGCATCATTTCAAATAGCGATGGGACAAACCTTATCAGATATT
GGCAACCTTCAGCCGATGACCTCATGGCAAATGATTGGGAAGTTATAAACCCAACTAGAGACCAGGAATTATTGAAGCAA
TTTTAG
ATGAACATTCAAGAAGCAACTAAGATAGCTACAAAAAATCTTGTCTCTATGACACGGAAAGATTGGAAAGAAAGTCATCG
AACTAAGATATTACCAACAAATGATAGTTTTTTACAATGCATCATTTCAAATAGCGATGGGACAAACCTTATCAGATATT
GGCAACCTTCAGCCGATGACCTCATGGCAAATGATTGGGAAGTTATAAACCCAACTAGAGACCAGGAATTATTGAAGCAA
TTTTAG
Antitoxin
Download Length: 366 bp
>AT31751 NZ_AP018349:1640274-1640639 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|