Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) TMCS/-
Location 1640274..1640853 Replicon chromosome
Accession NZ_AP018349
Organism Staphylococcus aureus strain GN1

Toxin (Protein)


Gene name MW1434 Uniprot ID A0A4P7P609
Locus tag D8S83_RS08110 Protein ID WP_001025401.1
Coordinates 1640608..1640853 (-) Length 82 a.a.

Antitoxin (RNA)


Gene name MW1433
Locus tag -
Coordinates 1640274..1640639 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D8S83_RS08070 1637018..1637575 - 558 WP_000645045.1 DUF2815 family protein -
D8S83_RS08075 1637601..1638767 - 1167 WP_000762530.1 DUF2800 domain-containing protein -
D8S83_RS08080 1638764..1639126 - 363 WP_000985972.1 hypothetical protein -
D8S83_RS08085 1639141..1639464 - 324 WP_000174998.1 hypothetical protein -
D8S83_RS08090 1639543..1639704 - 162 WP_001285954.1 DUF1270 domain-containing protein -
D8S83_RS08095 1639716..1639979 - 264 WP_001124198.1 helix-turn-helix domain-containing protein -
D8S83_RS08100 1640004..1640219 - 216 WP_001097552.1 hypothetical protein -
D8S83_RS08105 1640274..1640639 + 366 WP_001128433.1 hypothetical protein Antitoxin
D8S83_RS08110 1640608..1640853 - 246 WP_001025401.1 DUF2829 domain-containing protein Toxin
D8S83_RS08115 1640903..1641121 - 219 WP_001001383.1 hypothetical protein -
D8S83_RS08120 1641137..1641692 - 556 Protein_1526 phage antirepressor KilAC domain-containing protein -
D8S83_RS08125 1641718..1641945 - 228 WP_001030311.1 hypothetical protein -
D8S83_RS08130 1642117..1642731 + 615 WP_000801423.1 XRE family transcriptional regulator -
D8S83_RS08135 1642747..1643667 + 921 WP_000348133.1 3'-5' exoribonuclease -
D8S83_RS08140 1643763..1643945 + 183 WP_000705240.1 hypothetical protein -
D8S83_RS08145 1644090..1644713 - 624 WP_001166482.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - lukF-PV / lukS-PV 1596957..1663657 66700


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(2-69)


Sequences


Toxin        


Download         Length: 82 a.a.        Molecular weight: 9468.72 Da        Isoelectric Point: 5.7783

>T31751 WP_001025401.1 NZ_AP018349:c1640853-1640608 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F

Download         Length: 246 bp

>T31751 NZ_AP018349:c1640853-1640608 [Staphylococcus aureus]
ATGAACATTCAAGAAGCAACTAAGATAGCTACAAAAAATCTTGTCTCTATGACACGGAAAGATTGGAAAGAAAGTCATCG
AACTAAGATATTACCAACAAATGATAGTTTTTTACAATGCATCATTTCAAATAGCGATGGGACAAACCTTATCAGATATT
GGCAACCTTCAGCCGATGACCTCATGGCAAATGATTGGGAAGTTATAAACCCAACTAGAGACCAGGAATTATTGAAGCAA
TTTTAG

Antitoxin


Download         Length: 366 bp

>AT31751 NZ_AP018349:1640274-1640639 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A4P7P609


Antitoxin

Download structure file

References