Detailed information of TA system TA031737

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): prlF-yhaV (relBE)/YhaV-PrlF
• Location: 9117857..9118701
• Replicon: chromosome
• Accession: NZ_AP018255
• Organism: Calothrix sp. NIES-4071

Toxin (Protein)

• Gene name: yhaV
• Uniprot ID: -
• Locus tag: CDC41_RS40155
• Protein ID: WP_096691903.1
• Coordinates: 9117857..9118366 (-)
• Length: 170 a.a.

Antitoxin (Protein)

• Gene name: prlF
• Uniprot ID: -
• Locus tag: CDC41_RS40160
• Protein ID: WP_096691904.1
• Coordinates: 9118369..9118701 (-)
• Length: 111 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Toxin endonuclease, YhaV (14-150)

Antitoxin

• PrlF antitoxin (10-108)

Sequences

Toxin

Protein

• Length: 170 a.a.
• Molecular weight: 20437.25 Da
• Isoelectric Point: 9.0582

>T31737 WP_096691903.1 NZ_AP018255:c9118366-9117857 [Calothrix sp. NIES-4071]
MSTSQPLVINGWSIFAHPLFLDELEELLNSVELLRQNDPQNYHKKNTTKRLAAIIKLVFEVIPTEPTRNEYRQGATLGDK
YKHWFRAKFFQQYRLFFRYHQESRIIIFVWVNDEKSKRAYDSKTDAYRVFKKMLQNDYPPDDWDILLKQAEAELNRLQKS
YEKLKEDEQ

Nucleotide

• Length: 510 bp

>T31737 NZ_AP018255:c9118366-9117857 [Calothrix sp. NIES-4071]
TTGTCTACAAGTCAACCATTAGTAATTAATGGGTGGAGTATTTTTGCCCATCCGCTTTTTCTTGACGAACTTGAGGAGCT
TTTGAATTCTGTTGAACTTCTGCGTCAAAACGACCCTCAAAATTACCATAAAAAAAATACTACAAAACGTTTAGCCGCCA
TCATTAAACTTGTATTTGAAGTTATTCCTACTGAACCTACACGTAACGAGTATCGTCAAGGTGCGACTCTAGGCGATAAG
TATAAACATTGGTTCCGAGCCAAATTTTTTCAACAATATAGACTGTTCTTTAGGTATCACCAAGAAAGTAGGATAATTAT
ATTCGTTTGGGTCAATGATGAAAAATCTAAGCGAGCTTATGACAGTAAGACTGACGCTTACCGAGTCTTTAAAAAAATGC
TTCAAAATGACTACCCTCCGGATGATTGGGATATTCTCCTTAAACAAGCAGAAGCTGAACTTAACCGTTTGCAAAAAAGC
TACGAGAAGCTGAAAGAAGACGAGCAATAA

Antitoxin

Protein

• Length: 111 a.a.
• Molecular weight: 12446.93 Da
• Isoelectric Point: 4.2864

>AT31737 WP_096691904.1 NZ_AP018255:c9118701-9118369 [Calothrix sp. NIES-4071]
MAKDFTFQAESTLTDRYQTTIPESVRKALGLNKRDKIHYAIQPNGQVIISNADDVENDPVLGEFLDFLAKDIKNNPQRIK
PITSDLLRRAQSLVADVEFDIDVPLSDEDE

Nucleotide

• Length: 333 bp

>AT31737 NZ_AP018255:c9118701-9118369 [Calothrix sp. NIES-4071]
ATGGCTAAAGATTTTACTTTTCAAGCAGAATCCACTCTTACTGACCGATACCAAACCACAATTCCTGAAAGTGTGCGAAA
AGCCTTGGGCTTAAATAAGCGCGATAAAATTCATTACGCAATTCAGCCAAATGGTCAAGTCATTATTTCAAATGCTGACG
ATGTGGAAAATGACCCAGTGCTTGGAGAGTTTTTGGATTTTCTTGCCAAAGATATCAAAAATAATCCTCAGCGAATTAAA
CCAATCACTTCTGATTTGCTCAGACGTGCCCAGTCCTTAGTGGCTGATGTTGAGTTTGATATCGATGTACCCTTGTCTGA
TGAGGATGAGTAA