Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | higBA (relBE)/RelE-MqsA |
Location | 1582293..1582926 | Replicon | chromosome |
Accession | NZ_AP014635 | ||
Organism | Vibrio tritonius strain AM2 |
Toxin (Protein)
Gene name | higB | Uniprot ID | - |
Locus tag | JCM16456_RS07120 | Protein ID | WP_068715947.1 |
Coordinates | 1582293..1582625 (+) | Length | 111 a.a. |
Antitoxin (Protein)
Gene name | higA | Uniprot ID | - |
Locus tag | JCM16456_RS07125 | Protein ID | WP_068713556.1 |
Coordinates | 1582612..1582926 (+) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JCM16456_RS07095 | 1577960..1578340 | + | 381 | WP_068713552.1 | hypothetical protein | - |
JCM16456_RS07100 | 1578454..1579230 | - | 777 | WP_068713553.1 | ferredoxin--NADP reductase | - |
JCM16456_RS07105 | 1579292..1579843 | - | 552 | WP_068713554.1 | class I SAM-dependent methyltransferase | - |
JCM16456_RS07110 | 1580347..1581876 | + | 1530 | WP_082712239.1 | DUF1593 domain-containing protein | - |
JCM16456_RS07120 | 1582293..1582625 | + | 333 | WP_068715947.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
JCM16456_RS07125 | 1582612..1582926 | + | 315 | WP_068713556.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin |
JCM16456_RS07130 | 1583041..1583343 | - | 303 | WP_068713557.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
JCM16456_RS07135 | 1583361..1583603 | - | 243 | WP_068713558.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
JCM16456_RS07140 | 1583818..1584216 | + | 399 | WP_068713559.1 | hypothetical protein | - |
JCM16456_RS07145 | 1584295..1584684 | + | 390 | WP_068713560.1 | hypothetical protein | - |
JCM16456_RS07150 | 1584737..1585939 | - | 1203 | WP_068713561.1 | MFS transporter | - |
JCM16456_RS07155 | 1586281..1587297 | - | 1017 | WP_068713562.1 | LacI family DNA-binding transcriptional regulator | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 111 a.a. Molecular weight: 13013.78 Da Isoelectric Point: 9.6344
>T30801 WP_068715947.1 NZ_AP014635:1582293-1582625 [Vibrio tritonius]
MKSVFVESSIFEKYREHYLNDDEYRLFQAELMSNPKYGDVIQGTGGLRKIRVASKGKGKRGGSRVIYYYLDEHHRFYLLT
IYAKNEMSDLTADQKKQLKAFMEAWRNEQS
MKSVFVESSIFEKYREHYLNDDEYRLFQAELMSNPKYGDVIQGTGGLRKIRVASKGKGKRGGSRVIYYYLDEHHRFYLLT
IYAKNEMSDLTADQKKQLKAFMEAWRNEQS
Download Length: 333 bp
>T30801 NZ_AP014635:1582293-1582625 [Vibrio tritonius]
ATGAAAAGTGTATTTGTTGAATCGAGTATATTTGAAAAGTACCGAGAGCATTATCTTAACGATGACGAGTATAGGCTTTT
TCAAGCGGAACTCATGTCTAATCCCAAGTATGGCGATGTAATCCAAGGTACAGGAGGTTTGCGAAAAATTCGAGTAGCAA
GCAAGGGCAAAGGGAAGCGTGGTGGTTCACGCGTTATCTATTACTATCTCGATGAACATCATCGATTCTACTTGCTTACC
ATTTATGCAAAGAATGAAATGTCGGATTTAACCGCAGATCAAAAGAAACAGTTAAAAGCTTTTATGGAGGCATGGCGCAA
TGAGCAATCGTGA
ATGAAAAGTGTATTTGTTGAATCGAGTATATTTGAAAAGTACCGAGAGCATTATCTTAACGATGACGAGTATAGGCTTTT
TCAAGCGGAACTCATGTCTAATCCCAAGTATGGCGATGTAATCCAAGGTACAGGAGGTTTGCGAAAAATTCGAGTAGCAA
GCAAGGGCAAAGGGAAGCGTGGTGGTTCACGCGTTATCTATTACTATCTCGATGAACATCATCGATTCTACTTGCTTACC
ATTTATGCAAAGAATGAAATGTCGGATTTAACCGCAGATCAAAAGAAACAGTTAAAAGCTTTTATGGAGGCATGGCGCAA
TGAGCAATCGTGA
Antitoxin
Download Length: 105 a.a. Molecular weight: 11879.32 Da Isoelectric Point: 5.9765
>AT30801 WP_068713556.1 NZ_AP014635:1582612-1582926 [Vibrio tritonius]
MSNRDLFTELSSALIEAKEHSEGKLTLKNHQFNNVGELDISPDEIVDIREQFNMSRGVFARLLHTSSRTLENWEQGRSTP
NGQAITLLRLVQRHPETLTHIAEL
MSNRDLFTELSSALIEAKEHSEGKLTLKNHQFNNVGELDISPDEIVDIREQFNMSRGVFARLLHTSSRTLENWEQGRSTP
NGQAITLLRLVQRHPETLTHIAEL
Download Length: 315 bp
>AT30801 NZ_AP014635:1582612-1582926 [Vibrio tritonius]
ATGAGCAATCGTGATCTATTTACAGAATTAAGTTCAGCTCTTATTGAAGCTAAAGAGCATTCAGAAGGTAAGTTAACGCT
GAAAAATCATCAGTTTAATAATGTTGGTGAATTAGACATTTCACCTGATGAGATAGTTGATATCCGTGAACAATTTAATA
TGTCACGAGGGGTATTTGCCCGTTTACTTCATACGTCGTCACGTACATTGGAAAACTGGGAACAAGGGCGCAGTACTCCC
AATGGGCAAGCAATAACACTTCTAAGATTGGTTCAACGCCACCCTGAAACTCTGACTCATATCGCAGAGCTATAA
ATGAGCAATCGTGATCTATTTACAGAATTAAGTTCAGCTCTTATTGAAGCTAAAGAGCATTCAGAAGGTAAGTTAACGCT
GAAAAATCATCAGTTTAATAATGTTGGTGAATTAGACATTTCACCTGATGAGATAGTTGATATCCGTGAACAATTTAATA
TGTCACGAGGGGTATTTGCCCGTTTACTTCATACGTCGTCACGTACATTGGAAAACTGGGAACAAGGGCGCAGTACTCCC
AATGGGCAAGCAATAACACTTCTAAGATTGGTTCAACGCCACCCTGAAACTCTGACTCATATCGCAGAGCTATAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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