Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) bsrE-as-bsrE/-
Location 2022138..2022384 Replicon chromosome
Accession NC_022898
Organism Bacillus subtilis PY79

Toxin (Protein)


Gene name bsrE Uniprot ID -
Locus tag U712_RS21500 Protein ID WP_109789044.1
Coordinates 2022138..2022230 (+) Length 31 a.a.

Antitoxin (RNA)


Gene name as-bsrE
Locus tag -
Coordinates 2022211..2022384 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
U712_RS09825 2017297..2017632 + 336 WP_009967409.1 hypothetical protein -
U712_RS09830 2017679..2021284 - 3606 WP_004399367.1 membrane protein -
U712_RS09835 2021517..2021849 - 333 WP_026009814.1 hypothetical protein -
U712_RS21500 2022138..2022230 + 93 WP_109789044.1 type I toxin-antitoxin system toxin BsrE Toxin
- 2022211..2022384 - 174 - - Antitoxin
U712_RS09840 2022499..2023341 - 843 WP_003231327.1 hypothetical protein -
U712_RS09845 2023541..2023999 - 459 WP_003231326.1 type II toxin-antitoxin system antitoxin YobK -
U712_RS09850 2024009..2025811 - 1803 WP_004399481.1 type II toxin-antitoxin system toxin ribonuclease YobL -
U712_RS09855 2025913..2026470 - 558 WP_004399321.1 SMI1/KNR4 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2008123..2031801 23678


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(1-24)


Sequences

Toxin        


Download         Length: 31 a.a.        Molecular weight: 3358.16 Da        Isoelectric Point: 4.1840

>T30339 WP_109789044.1 NC_022898:2022138-2022230 [Bacillus subtilis PY79]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP

Download         Length: 93 bp

>T30339 NC_022898:2022138-2022230 [Bacillus subtilis PY79]
ATGTCAACATTCCAGGCATTAATGCTAATGCTTGCAATCGGGTCGTTTATAATCGCCCTATTGACGTATATAGAAAAAAT
AGACCTCCCTTGA

Antitoxin


Download         Length: 174 bp

>AT30339 NC_022898:c2022384-2022211 [Bacillus subtilis PY79]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References