Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrE/- |
Location | 1705352..1705564 | Replicon | |
Accession | NC_022530 | ||
Organism | Bacillus amyloliquefaciens subsp. plantarum NAU-B3 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | A0A4V7TPQ9 |
Locus tag | BAPNAU_RS08395 | Protein ID | WP_041482523.1 |
Coordinates | 1705385..1705564 (+) | Length | 60 a.a. |
Antitoxin (RNA)
Gene name | as-bsrE | ||
Locus tag | - | ||
Coordinates | 1705352..1705438 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BAPNAU_RS08370 | 1700372..1702246 | - | 1875 | Protein_1615 | hypothetical protein | - |
BAPNAU_RS08375 | 1702287..1702466 | - | 180 | WP_014417885.1 | hypothetical protein | - |
BAPNAU_RS08380 | 1702585..1702821 | - | 237 | WP_020954165.1 | helix-turn-helix domain-containing protein | - |
BAPNAU_RS08385 | 1703000..1703284 | + | 285 | WP_021493592.1 | hypothetical protein | - |
BAPNAU_RS08390 | 1703284..1704396 | + | 1113 | WP_022553089.1 | hypothetical protein | - |
- | 1705352..1705438 | - | 87 | NuclAT_1 | - | Antitoxin |
- | 1705352..1705438 | - | 87 | NuclAT_1 | - | Antitoxin |
- | 1705352..1705438 | - | 87 | NuclAT_1 | - | Antitoxin |
- | 1705352..1705438 | - | 87 | NuclAT_1 | - | Antitoxin |
BAPNAU_RS08395 | 1705385..1705564 | + | 180 | WP_041482523.1 | hypothetical protein | Toxin |
BAPNAU_RS08405 | 1705867..1706106 | + | 240 | WP_014472020.1 | hypothetical protein | - |
BAPNAU_RS08410 | 1706187..1707419 | + | 1233 | WP_041482525.1 | hypothetical protein | - |
BAPNAU_RS08415 | 1707727..1709598 | + | 1872 | WP_022553092.1 | OmpH family outer membrane protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1644892..1794968 | 150076 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 60 a.a. Molecular weight: 7070.74 Da Isoelectric Point: 12.4499
>T30151 WP_041482523.1 NC_022530:1705385-1705564 [Bacillus velezensis NAU-B3]
VLEKVGITIAFLIPITVLIINCLTIAEKIQNLMKNKESKKKKRTRKRLRSKRQRKRIRR
VLEKVGITIAFLIPITVLIINCLTIAEKIQNLMKNKESKKKKRTRKRLRSKRQRKRIRR
Download Length: 180 bp
>T30151 NC_022530:1705385-1705564 [Bacillus velezensis NAU-B3]
GTGCTTGAGAAAGTGGGTATAACAATTGCTTTCCTTATTCCTATCACGGTTTTAATCATCAACTGTTTAACAATAGCTGA
GAAGATTCAAAACCTGATGAAGAATAAAGAAAGCAAAAAGAAAAAGCGTACACGCAAGCGCCTCCGTAGCAAGAGACAAC
GCAAACGTATACGCAGATAA
GTGCTTGAGAAAGTGGGTATAACAATTGCTTTCCTTATTCCTATCACGGTTTTAATCATCAACTGTTTAACAATAGCTGA
GAAGATTCAAAACCTGATGAAGAATAAAGAAAGCAAAAAGAAAAAGCGTACACGCAAGCGCCTCCGTAGCAAGAGACAAC
GCAAACGTATACGCAGATAA
Antitoxin
Download Length: 87 bp
>AT30151 NC_022530:c1705438-1705352 [Bacillus velezensis NAU-B3]
TAAAACCGTGATAGGAATAAGGAAAGCAATTGTTATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTATAACTC
TATTATA
TAAAACCGTGATAGGAATAAGGAAAGCAATTGTTATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTATAACTC
TATTATA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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