296991

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/HTH_37(antitoxin)
Location 501400..501978 Replicon chromosome
Accession NZ_OX460909
Organism Photobacterium phosphoreum strain MIP2473 isolate MIP2473

Toxin (Protein)


Gene name higB Uniprot ID -
Locus tag QOS47_RS02540 Protein ID WP_268875251.1
Coordinates 501799..501978 (-) Length 60 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag QOS47_RS02530 Protein ID WP_232605835.1
Coordinates 501400..501675 (-) Length 92 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QOS47_RS02505 497832..498176 + 345 WP_045032219.1 hypothetical protein -
QOS47_RS02510 498287..498520 - 234 WP_045032221.1 hypothetical protein -
QOS47_RS02515 499058..499300 + 243 WP_045032924.1 hypothetical protein -
QOS47_RS02520 499555..500706 + 1152 WP_107188197.1 iron-containing alcohol dehydrogenase -
QOS47_RS02530 501400..501675 - 276 WP_232605835.1 helix-turn-helix transcriptional regulator Antitoxin
QOS47_RS02535 501672..501794 - 123 WP_232613877.1 type II toxin-antitoxin system RelE/ParE family toxin -
QOS47_RS02540 501799..501978 - 180 WP_268875251.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QOS47_RS02545 502222..502524 - 303 WP_045032858.1 helix-turn-helix transcriptional regulator -
QOS47_RS02550 502527..502874 - 348 WP_045032861.1 type II toxin-antitoxin system RelE/ParE family toxin -
QOS47_RS02555 503327..503605 - 279 WP_283597067.1 hypothetical protein -
QOS47_RS02560 503841..504365 - 525 WP_283597070.1 heavy metal-binding domain-containing protein -
QOS47_RS02565 505038..505280 + 243 WP_045032924.1 hypothetical protein -
QOS47_RS02570 505535..506686 + 1152 WP_283597072.1 iron-containing alcohol dehydrogenase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(9-57)

Antitoxin

Cro/C1-type helix-turn-helix domain

(33-81)


Sequences

Toxin        


Download         Length: 60 a.a.        Molecular weight: 6519.51 Da        Isoelectric Point: 4.6436

>T296991 WP_268875251.1 NZ_OX460909:c501978-501799 [Photobacterium phosphoreum]
VDFYSGVEDEILAMPPKIQARMIKLLELIELHGANLGPPHTDSMGDGLFEIRAKAQEGR

Download         Length: 180 bp

Antitoxin


Download         Length: 92 a.a.        Molecular weight: 10034.51 Da        Isoelectric Point: 8.9869

>AT296991 WP_232605835.1 NZ_OX460909:c501675-501400 [Photobacterium phosphoreum]
MSLSTLKRKALQNPEVKEAYDDLSVEFELISSLISMREKSGLTQDEVAEKMGTKAPNISRLESGRSNPSLKTLVSYAQAC
GFKLNIGFKHA

Download         Length: 276 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References