Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 1904061..1904278 Replicon chromosome
Accession NZ_OX419553
Organism Bacillus subtilis isolate NRS6183

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag KJP78_RS09605 Protein ID WP_019712271.1
Coordinates 1904102..1904278 (+) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 1904061..1904161 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KJP78_RS09585 (1899089) 1899089..1899260 - 172 Protein_1832 hypothetical protein -
KJP78_RS09590 (1899867) 1899867..1900145 - 279 WP_004399274.1 HU-related DNA-binding protein HupN -
KJP78_RS09595 (1900388) 1900388..1902907 - 2520 WP_213416700.1 DNA-directed RNA polymerase YonO -
KJP78_RS09600 (1902947) 1902947..1903141 - 195 WP_004399291.1 hypothetical protein -
- (1904061) 1904061..1904161 - 101 NuclAT_0 - Antitoxin
- (1904061) 1904061..1904161 - 101 NuclAT_0 - Antitoxin
- (1904061) 1904061..1904161 - 101 NuclAT_0 - Antitoxin
- (1904061) 1904061..1904161 - 101 NuclAT_0 - Antitoxin
KJP78_RS09605 (1904102) 1904102..1904278 + 177 WP_019712271.1 hypothetical protein Toxin
KJP78_RS09610 (1904297) 1904297..1904548 + 252 WP_080010576.1 hypothetical protein -
KJP78_RS09615 (1904593) 1904593..1904781 + 189 WP_213416699.1 hypothetical protein -
KJP78_RS09620 (1904898) 1904898..1905743 + 846 WP_213416698.1 GIY-YIG nuclease family protein -
KJP78_RS09625 (1905762) 1905762..1906979 + 1218 WP_213416697.1 hypothetical protein -
KJP78_RS09630 (1907310) 1907310..1909181 + 1872 WP_213416696.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 1838965..2012799 173834


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6864.42 Da        Isoelectric Point: 12.8833

>T296768 WP_019712271.1 NZ_OX419553:1904102-1904278 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 101 bp

>AT296768 NZ_OX419553:c1904161-1904061 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References