Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrG/- |
Location | 1853160..1853449 | Replicon | chromosome |
Accession | NZ_OX419553 | ||
Organism | Bacillus subtilis isolate NRS6183 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | KJP78_RS09350 | Protein ID | WP_009967548.1 |
Coordinates | 1853333..1853449 (-) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 1853160..1853338 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
KJP78_RS09325 (1848751) | 1848751..1849004 | + | 254 | Protein_1780 | hypothetical protein | - |
KJP78_RS09330 (1849070) | 1849070..1849627 | + | 558 | WP_153912309.1 | SMI1/KNR4 family protein | - |
KJP78_RS09335 (1849727) | 1849727..1851637 | + | 1911 | WP_041056183.1 | ribonuclease YeeF family protein | - |
KJP78_RS09340 (1851644) | 1851644..1852132 | + | 489 | WP_041056186.1 | antitoxin YezG family protein | - |
KJP78_RS09345 (1852146) | 1852146..1852709 | + | 564 | WP_250533594.1 | SMI1/KNR4 family protein | - |
- (1853160) | 1853160..1853338 | + | 179 | NuclAT_1 | - | Antitoxin |
- (1853160) | 1853160..1853338 | + | 179 | NuclAT_1 | - | Antitoxin |
- (1853160) | 1853160..1853338 | + | 179 | NuclAT_1 | - | Antitoxin |
- (1853160) | 1853160..1853338 | + | 179 | NuclAT_1 | - | Antitoxin |
KJP78_RS09350 (1853333) | 1853333..1853449 | - | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
KJP78_RS09355 (1853682) | 1853682..1854149 | + | 468 | WP_128992107.1 | DUF4879 domain-containing protein | - |
KJP78_RS09360 (1854155) | 1854155..1854511 | + | 357 | WP_019712874.1 | hypothetical protein | - |
KJP78_RS09365 (1854554) | 1854554..1854889 | - | 336 | WP_004399073.1 | hypothetical protein | - |
KJP78_RS09370 (1855063) | 1855063..1855395 | + | 333 | WP_128473977.1 | YolD-like family protein | - |
KJP78_RS09375 (1855388) | 1855388..1856638 | + | 1251 | WP_213416709.1 | UV damage repair protein UvrX | - |
KJP78_RS09380 (1856751) | 1856751..1857989 | + | 1239 | WP_142743355.1 | MFS transporter | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1838965..2012799 | 173834 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T296764 WP_009967548.1 NZ_OX419553:c1853449-1853333 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
Antitoxin
Download Length: 179 bp
>AT296764 NZ_OX419553:1853160-1853338 [Bacillus subtilis]
AATGATACAAATAATTATTTTTTGCATTTTGATTTGTAGAAATGCATAAAATAAAAAGACCAGGGTGCTACCAACACCCC
AGCTCTGTACAAAAAGCTGCCCATCAAAGGGCTTGCTCAGATGTATGTGACATAGTAGACCAACCCTTTAGGGTCGCAAT
CTCAAGGGGAGGTCTATTT
AATGATACAAATAATTATTTTTTGCATTTTGATTTGTAGAAATGCATAAAATAAAAAGACCAGGGTGCTACCAACACCCC
AGCTCTGTACAAAAAGCTGCCCATCAAAGGGCTTGCTCAGATGTATGTGACATAGTAGACCAACCCTTTAGGGTCGCAAT
CTCAAGGGGAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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