296231

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) HipBST/HipA(toxin)
Location 1534556..1535886 Replicon chromosome
Accession NZ_OW970315
Organism Pantoea agglomerans strain DAPP-PG734

Toxin (Protein)


Gene name HipT Uniprot ID -
Locus tag OOS96_RS07060 Protein ID WP_031591303.1
Coordinates 1534556..1535578 (-) Length 341 a.a.

Antitoxin (Protein)


Gene name HipS Uniprot ID -
Locus tag OOS96_RS07065 Protein ID WP_031591302.1
Coordinates 1535575..1535886 (-) Length 104 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OOS96_RS07045 (DAPPPG734_07160) 1530703..1531725 + 1023 WP_031591305.1 LLM class flavin-dependent oxidoreductase -
OOS96_RS07050 1531841..1532023 + 183 Protein_1365 hypothetical protein -
OOS96_RS07055 (DAPPPG734_07170) 1532211..1534430 + 2220 WP_033763610.1 catalase/peroxidase HPI -
OOS96_RS07060 (DAPPPG734_07175) 1534556..1535578 - 1023 WP_031591303.1 HipA domain-containing protein Toxin
OOS96_RS07065 (DAPPPG734_07180) 1535575..1535886 - 312 WP_031591302.1 HipA N-terminal domain-containing protein Antitoxin
OOS96_RS07070 (DAPPPG734_07185) 1535871..1536206 - 336 WP_031591301.1 hypothetical protein -
OOS96_RS07080 (DAPPPG734_07195) 1536983..1538104 + 1122 WP_031591300.1 Gfo/Idh/MocA family oxidoreductase -
OOS96_RS07085 (DAPPPG734_07200) 1538195..1539025 - 831 WP_031591299.1 glycosyltransferase family 8 protein -
OOS96_RS07090 (DAPPPG734_07205) 1539038..1540420 - 1383 WP_031591298.1 D-arabinono-1,4-lactone oxidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(58-302)

Antitoxin

HipA, N-terminal subdomain 1

(6-98)


Sequences

Toxin        


Download         Length: 341 a.a.        Molecular weight: 38576.14 Da        Isoelectric Point: 6.8346

>T296231 WP_031591303.1 NZ_OW970315:c1535578-1534556 [Pantoea agglomerans]
MNSERCLITLKRLKESELKTGYSTKGIRHLLGSLNVALSLPFTRSQFIQELPERQKGMSISGYQPKLSLRLEKGELVVVS
NDGTYILKPSPEEYPHLAENEHATMCVMQRLKFDVPPFGLMPFRHDENRPDELAFVIKRYDRTASDNARLHQEQLDGAMG
LGNKYGRIDNHKAISYEKAAKFLNTRVNSSLKSKRDLFLRIVYAYVLGNNDFHLRNIGIILPPQGSPWLAPVYDFISVVP
YPAAFGEYLALPLLEREENDAGNAPGLNSEYGEYLGADFILLAQGMDINPTLARKWLSEVVSHHQLIIDTYNESHMPESQ
REAVLDYVARRITLLAVTEI

Download         Length: 1023 bp

Antitoxin


Download         Length: 104 a.a.        Molecular weight: 11696.49 Da        Isoelectric Point: 4.7953

>AT296231 WP_031591302.1 NZ_OW970315:c1535886-1535575 [Pantoea agglomerans]
MARKIEVWLYNTLAGTLSEGQNGYTFCYLPTYVGCAISLSMPVRPEPYLSEELHPFFKGLAPEGWLRKRYSEIQKIDDKD
LFGLLMENGNDLLGAVVFKEITS

Download         Length: 312 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References