Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-YefM |
Location | 1325223..1325725 | Replicon | chromosome |
Accession | NZ_OW849064 | ||
Organism | Escherichia coli isolate 131 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | E2QNP2 |
Locus tag | LQ135_RS07085 | Protein ID | WP_000767819.1 |
Coordinates | 1325223..1325477 (-) | Length | 85 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | E2QNP3 |
Locus tag | LQ135_RS07090 | Protein ID | WP_001259253.1 |
Coordinates | 1325474..1325725 (-) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LQ135_RS07060 (1321041) | 1321041..1321499 | - | 459 | WP_230181294.1 | IS200/IS605-like element IS200C family transposase | - |
LQ135_RS07065 (1321716) | 1321716..1323074 | - | 1359 | WP_000019194.1 | putrescine/proton symporter PlaP | - |
LQ135_RS07070 (1323064) | 1323064..1323126 | - | 63 | WP_010723108.1 | membrane protein YoeI | - |
LQ135_RS07075 (1323341) | 1323341..1324270 | - | 930 | WP_000803366.1 | LysR substrate-binding domain-containing protein | - |
LQ135_RS07080 (1324316) | 1324316..1325140 | - | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
LQ135_RS07085 (1325223) | 1325223..1325477 | - | 255 | WP_000767819.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | Toxin |
LQ135_RS07090 (1325474) | 1325474..1325725 | - | 252 | WP_001259253.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin |
LQ135_RS07095 (1326008) | 1326008..1326058 | + | 51 | WP_001364200.1 | his operon leader peptide | - |
LQ135_RS07100 (1326204) | 1326204..1327103 | + | 900 | WP_000131782.1 | ATP phosphoribosyltransferase | - |
LQ135_RS07105 (1327109) | 1327109..1328413 | + | 1305 | WP_001296211.1 | histidinol dehydrogenase | - |
LQ135_RS07110 (1328410) | 1328410..1329480 | + | 1071 | WP_000108967.1 | histidinol-phosphate transaminase | - |
LQ135_RS07115 (1329480) | 1329480..1330547 | + | 1068 | WP_000080057.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | flank | IS/Tn | - | - | 1321041..1321499 | 458 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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