Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 409936..410215 Replicon chromosome
Accession NZ_LT992464
Organism Staphylococcus aureus isolate 3_LA_115

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag DXE56_RS02200 Protein ID WP_001802298.1
Coordinates 409936..410040 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF3
Locus tag -
Coordinates 410036..410215 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DXE56_RS02165 405835..406443 + 609 WP_000101714.1 TIR domain-containing protein -
DXE56_RS02170 406733..407515 + 783 WP_000908191.1 ABC transporter ATP-binding protein -
DXE56_RS02175 407583..408440 + 858 WP_000370942.1 Cof-type HAD-IIB family hydrolase -
DXE56_RS02180 408570..408662 - 93 WP_000220902.1 hypothetical protein -
DXE56_RS02185 409098..409256 - 159 WP_001792784.1 hypothetical protein -
DXE56_RS02200 409936..410040 + 105 WP_001802298.1 hypothetical protein Toxin
- 410036..410215 - 180 - - Antitoxin
DXE56_RS02205 410538..411629 - 1092 WP_000495673.1 hypothetical protein -
DXE56_RS02210 411895..412875 - 981 WP_000019735.1 CDF family zinc efflux transporter CzrB -
DXE56_RS02215 412877..413197 - 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
DXE56_RS02220 413349..414014 + 666 WP_001024099.1 SDR family oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T294132 WP_001802298.1 NZ_LT992464:409936-410040 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

Antitoxin


Download         Length: 180 bp

>AT294132 NZ_LT992464:c410215-410036 [Staphylococcus aureus]
GTGTTAAAATATATTTGTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTC
AAAGCGAATAGAAGGTTATT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9

Antitoxin

Download structure file

References