Detailed information of TA system TA293726

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): SprA2-sprA1AS/-
• Location: 79789..79937
• Replicon: chromosome
• Accession: NZ_LT906462
• Organism: Mammaliicoccus stepanovicii strain NCTC13839

Toxin (Protein)

• Gene name: SprA2
• Uniprot ID: -
• Locus tag: CKV64_RS12085
• Protein ID: WP_103268485.1
• Coordinates: 79842..79937 (-)
• Length: 32 a.a.

Antitoxin (RNA)

Gene name	sprA1AS
Locus tag	-
Coordinates	79789..79824 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CKV64_RS00325	75460..75702	-	243	WP_095085252.1	hypothetical protein	-
CKV64_RS00330	75995..76933	+	939	WP_095085253.1	TDT family transporter	-
CKV64_RS00335	77109..78666	+	1558	Protein_65	MFS transporter	-
CKV64_RS00340	78747..79655	+	909	WP_095085254.1	alpha/beta hydrolase	-
-	79789..79824	-	36	-	-	Antitoxin
CKV64_RS12085	79842..79937	-	96	WP_103268485.1	type I toxin-antitoxin system Fst family toxin	Toxin
CKV64_RS00345	80171..80866	+	696	WP_095085255.1	DUF969 domain-containing protein	-
CKV64_RS00350	80859..81785	+	927	WP_095085256.1	DUF979 domain-containing protein	-
CKV64_RS00355	81808..82449	+	642	WP_095085257.1	pyroglutamyl-peptidase I	-
CKV64_RS00360	82587..83546	+	960	WP_095085258.1	extracellular solute-binding protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 32 a.a.
• Molecular weight: 3623.38 Da
• Isoelectric Point: 9.5124

>T293726 WP_103268485.1 NZ_LT906462:c79937-79842 [Mammaliicoccus stepanovicii]
ILEILVHIMTTVISGCTIALFTHWLRKRNDK

Nucleotide

• Length: 96 bp

Antitoxin

Nucleotide

• Length: 36 bp

>AT293726 NZ_LT906462:c79824-79789 [Mammaliicoccus stepanovicii]
TACAAAAATCCCCTCACTATTTGCGGTAGTGAGGGG

Structures

Antitoxin