Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 4068438..4069131 Replicon chromosome
Accession NZ_LR890466
Organism Escherichia coli isolate MSB1_7A-sc-2280394

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag JMW16_RS19360 Protein ID WP_000415584.1
Coordinates 4068438..4068734 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag JMW16_RS19365 Protein ID WP_000650107.1
Coordinates 4068736..4069131 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMW16_RS19325 4063526..4063840 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
JMW16_RS19330 4063871..4064452 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
JMW16_RS19335 4064771..4065103 + 333 WP_023149630.1 DUF2645 family protein -
JMW16_RS19340 4065149..4066498 - 1350 WP_000673402.1 two-component system sensor histidine kinase QseC -
JMW16_RS19345 4066495..4067154 - 660 WP_001221493.1 two-component system response regulator QseB -
JMW16_RS19350 4067306..4067698 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
JMW16_RS19355 4067751..4068233 + 483 WP_000183505.1 transcriptional regulator -
JMW16_RS19360 4068438..4068734 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
JMW16_RS19365 4068736..4069131 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
JMW16_RS19370 4069264..4070871 + 1608 WP_001295629.1 ABC transporter substrate-binding protein -
JMW16_RS19375 4071009..4073267 + 2259 WP_032180246.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T291106 WP_000415584.1 NZ_LR890466:4068438-4068734 [Escherichia coli]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT291106 WP_000650107.1 NZ_LR890466:4068736-4069131 [Escherichia coli]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References