Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/HigB-VapI
Location 2531998..2532611 Replicon chromosome
Accession NZ_LR882950
Organism Planktothrix agardhii strain PCC7805

Toxin (Protein)


Gene name graT Uniprot ID -
Locus tag NMG85_RS11505 Protein ID WP_235752057.1
Coordinates 2531998..2532282 (+) Length 95 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag NMG85_RS11510 Protein ID WP_235752056.1
Coordinates 2532297..2532611 (+) Length 105 a.a.

Genomic Context

NMG85_RS11475NMG85_RS11480NMG85_RS11485NMG85_RS11490NMG85_RS11495NMG85_RS11500NMG85_RS11505NMG85_RS11510NMG85_RS11530NMG85_RS11515NMG85_RS11520NMG85_RS11525NMG85_RS11535
Location: 2528827..2529048 (222 bp)
Type: Others
Protein ID: WP_227381101.1
Location: 2529070..2529282 (213 bp)
Type: Others
Protein ID: WP_042156661.1
Location: 2529416..2529733 (318 bp)
Type: Others
Protein ID: WP_235752061.1
Location: 2529733..2530011 (279 bp)
Type: Others
Protein ID: WP_235752060.1
Location: 2530054..2531292 (1239 bp)
Type: Others
Protein ID: WP_042156657.1
Location: 2531282..2531860 (579 bp)
Type: Others
Protein ID: WP_235752058.1
Location: 2531998..2532282 (285 bp)
Type: Toxin
Protein ID: WP_235752057.1
Location: 2532297..2532611 (315 bp)
Type: Antitoxin
Protein ID: WP_235752056.1
Location: 2534749..2535333 (585 bp)
Type: Others
Protein ID: WP_235766119.1
Location: 2532677..2533252 (576 bp)
Type: Others
Protein ID: WP_235752055.1
Location: 2533367..2533708 (342 bp)
Type: Others
Protein ID: WP_235752054.1
Location: 2533705..2533938 (234 bp)
Type: Others
Protein ID: WP_042156647.1
Location: 2535462..2536037 (576 bp)
Type: Others
Protein ID: WP_235766118.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
NMG85_RS11475 (PCC7805_02307)2528827..2529048+222WP_227381101.1hypothetical protein-
NMG85_RS11480 (PCC7805_02308)2529070..2529282+213WP_042156661.1hypothetical protein-
NMG85_RS11485 (PCC7805_02309)2529416..2529733+318WP_235752061.1type II toxin-antitoxin system Phd/YefM family antitoxin-
NMG85_RS11490 (PCC7805_02310)2529733..2530011+279WP_235752060.1type II toxin-antitoxin system RelE/ParE family toxin-
NMG85_RS11495 (PCC7805_02311)2530054..2531292+1239WP_042156657.1ATP-binding protein-
NMG85_RS11500 (PCC7805_02312)2531282..2531860+579WP_235752058.1DUF4276 family protein-
NMG85_RS11505 (PCC7805_02313)2531998..2532282+285WP_235752057.1type II toxin-antitoxin system RelE/ParE family toxinToxin
NMG85_RS11510 (PCC7805_02314)2532297..2532611+315WP_235752056.1HigA family addiction module antitoxinAntitoxin
NMG85_RS11515 (PCC7805_02315)2532677..2533252-576WP_235752055.1Uma2 family endonuclease-
NMG85_RS11520 (PCC7805_02316)2533367..2533708-342WP_235752054.1type II toxin-antitoxin system PemK/MazF family toxin-
NMG85_RS11525 (PCC7805_02317)2533705..2533938-234WP_042156647.1hypothetical protein-
NMG85_RS11530 (PCC7805_02319)2534749..2535333+585WP_235766119.1transposase-
NMG85_RS11535 (PCC7805_02320)2535462..2536037-576WP_235766118.1Uma2 family endonuclease-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-1

(3-94)

Antitoxin

Cro/C1-type helix-turn-helix domain

(15-57)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11221.74 Da        Isoelectric Point: 9.7476

>T289975 WP_235752057.1 NZ_LR882950:2531998-2532282 [Planktothrix agardhii]
MPQKYKDKRTAKFAAGDRVKEFQAFERQAYKRLEILEAAPNKESLKALPSNRFEALGGDRKGQYSIRINDKWRICFEWTE
TENRPFHIEIVDYH

Download         Length: 285 bp

Antitoxin


Download         Length: 105 a.a.        Molecular weight: 11568.18 Da        Isoelectric Point: 5.6957

>AT289975 WP_235752056.1 NZ_LR882950:2532297-2532611 [Planktothrix agardhii]
MARPAIHPGEILSDELEELGISASELARSLHIPTNRITQILKGQRGITADTALRLGRWFGTGAELWLNLQKTYELRLAQE
LAGEEIQNTIQPRSSINNQPLVQV

Download         Length: 315 bp


Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References