Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-RelB |
| Location | 220937..221288 | Replicon | chromosome |
| Accession | NZ_LR882944 | ||
| Organism | Planktothrix agardhii strain No.365 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | - |
| Locus tag | NMG87_RS00880 | Protein ID | WP_081693770.1 |
| Coordinates | 220937..221086 (-) | Length | 50 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | - |
| Locus tag | NMG87_RS00885 | Protein ID | WP_254033164.1 |
| Coordinates | 221079..221288 (-) | Length | 70 a.a. |
Genomic Context
Location: 216636..218021 (1386 bp)
Type: Others
Protein ID: Protein_166
Type: Others
Protein ID: Protein_166
Location: 219929..220060 (132 bp)
Type: Others
Protein ID: WP_026796378.1
Type: Others
Protein ID: WP_026796378.1
Location: 218435..219652 (1218 bp)
Type: Others
Protein ID: WP_227350540.1
Type: Others
Protein ID: WP_227350540.1
Location: 220103..220513 (411 bp)
Type: Others
Protein ID: WP_227351489.1
Type: Others
Protein ID: WP_227351489.1
Location: 220722..220901 (180 bp)
Type: Others
Protein ID: WP_227365709.1
Type: Others
Protein ID: WP_227365709.1
Location: 220937..221086 (150 bp)
Type: Toxin
Protein ID: WP_081693770.1
Type: Toxin
Protein ID: WP_081693770.1
Location: 221079..221288 (210 bp)
Type: Antitoxin
Protein ID: WP_254033164.1
Type: Antitoxin
Protein ID: WP_254033164.1
Location: 221497..221970 (474 bp)
Type: Others
Protein ID: WP_227357893.1
Type: Others
Protein ID: WP_227357893.1
Location: 222058..223797 (1740 bp)
Type: Others
Protein ID: WP_254033165.1
Type: Others
Protein ID: WP_254033165.1
Location: 223790..224329 (540 bp)
Type: Others
Protein ID: WP_042153957.1
Type: Others
Protein ID: WP_042153957.1
Location: 224433..225122 (690 bp)
Type: Others
Protein ID: WP_227350534.1
Type: Others
Protein ID: WP_227350534.1
Location: 225386..225961 (576 bp)
Type: Others
Protein ID: WP_254033166.1
Type: Others
Protein ID: WP_254033166.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMG87_RS00855 (NO365_00182) | 216636..218021 | + | 1386 | Protein_166 | cobaltochelatase subunit CobN | - |
| NMG87_RS00860 (NO365_00183) | 218435..219652 | - | 1218 | WP_227350540.1 | glycosyltransferase family 4 protein | - |
| NMG87_RS00865 (NO365_00184) | 219929..220060 | + | 132 | WP_026796378.1 | photosystem II reaction center protein Ycf12 | - |
| NMG87_RS00870 (NO365_00185) | 220103..220513 | - | 411 | WP_227351489.1 | DUF4346 domain-containing protein | - |
| NMG87_RS00875 (NO365_00186) | 220722..220901 | - | 180 | WP_227365709.1 | hypothetical protein | - |
| NMG87_RS00880 | 220937..221086 | - | 150 | WP_081693770.1 | type II toxin-antitoxin system YoeB family toxin | Toxin |
| NMG87_RS00885 (NO365_00187) | 221079..221288 | - | 210 | WP_254033164.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| NMG87_RS00890 (NO365_00188) | 221497..221970 | - | 474 | WP_227357893.1 | hypothetical protein | - |
| NMG87_RS00895 (NO365_00189) | 222058..223797 | - | 1740 | WP_254033165.1 | solute carrier family 26 protein | - |
| NMG87_RS00900 (NO365_00190) | 223790..224329 | - | 540 | WP_042153957.1 | rhodanese-like domain-containing protein | - |
| NMG87_RS00905 (NO365_00191) | 224433..225122 | - | 690 | WP_227350534.1 | MBL fold metallo-hydrolase | - |
| NMG87_RS00910 (NO365_00192) | 225386..225961 | - | 576 | WP_254033166.1 | Uma2 family endonuclease | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.