Detailed information of TA system TA288873

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): SprA2-SprA2AS/-
• Location: 38805..38961
• Replicon: chromosome
• Accession: NZ_LR735429
• Organism: Staphylococcus epidermidis strain none isolate Se_BPH0704

Toxin (Protein)

• Gene name: SprA2
• Uniprot ID: -
• Locus tag: GOZ23_RS00155
• Protein ID: WP_099560939.1
• Coordinates: 38866..38961 (-)
• Length: 32 a.a.

Antitoxin (RNA)

Gene name	SprA2AS
Locus tag	-
Coordinates	38805..38841 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
GOZ23_RS00140	35127..35708	+	582	WP_061544235.1	restriction endonuclease subunit S	-
GOZ23_RS00145	35709..37265	+	1557	WP_061544234.1	type I restriction-modification system subunit M	-
GOZ23_RS12530	37258..37767	+	510	Protein_26	restriction endonuclease subunit S	-
GOZ23_RS12535	37855..38496	+	642	WP_196765188.1	restriction endonuclease subunit S	-
-	38805..38841	+	37	-	-	Antitoxin
GOZ23_RS00155	38866..38961	-	96	WP_099560939.1	type I toxin-antitoxin system Fst family toxin	Toxin
GOZ23_RS00160	39162..39383	-	222	WP_061544232.1	hypothetical protein	-
GOZ23_RS00165	39398..39901	-	504	WP_037559702.1	DUF1643 domain-containing protein	-
GOZ23_RS00170	39916..40227	-	312	WP_061544231.1	hypothetical protein	-
GOZ23_RS00175	40314..40664	-	351	WP_061544230.1	hypothetical protein	-
GOZ23_RS00180	41169..42797	-	1629	WP_061642462.1	recombinase family protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 32 a.a.
• Molecular weight: 3503.15 Da
• Isoelectric Point: 7.9875

>T288873 WP_099560939.1 NZ_LR735429:c38961-38866 [Staphylococcus epidermidis]
MADILVNIMTTAASGCIVALFSYWLRKRDDK

Nucleotide

• Length: 96 bp

Antitoxin

Nucleotide

• Length: 37 bp

>AT288873 NZ_LR735429:38805-38841 [Staphylococcus epidermidis]
ATGCACCAATCCCCTCACTACTGCCATAGTGAGGGGA

Structures

Antitoxin