Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 38805..38961 Replicon chromosome
Accession NZ_LR735429
Organism Staphylococcus epidermidis strain none isolate Se_BPH0704

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag GOZ23_RS00155 Protein ID WP_099560939.1
Coordinates 38866..38961 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 38805..38841 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GOZ23_RS00140 35127..35708 + 582 WP_061544235.1 restriction endonuclease subunit S -
GOZ23_RS00145 35709..37265 + 1557 WP_061544234.1 type I restriction-modification system subunit M -
GOZ23_RS12530 37258..37767 + 510 Protein_26 restriction endonuclease subunit S -
GOZ23_RS12535 37855..38496 + 642 WP_196765188.1 restriction endonuclease subunit S -
- 38805..38841 + 37 - - Antitoxin
GOZ23_RS00155 38866..38961 - 96 WP_099560939.1 type I toxin-antitoxin system Fst family toxin Toxin
GOZ23_RS00160 39162..39383 - 222 WP_061544232.1 hypothetical protein -
GOZ23_RS00165 39398..39901 - 504 WP_037559702.1 DUF1643 domain-containing protein -
GOZ23_RS00170 39916..40227 - 312 WP_061544231.1 hypothetical protein -
GOZ23_RS00175 40314..40664 - 351 WP_061544230.1 hypothetical protein -
GOZ23_RS00180 41169..42797 - 1629 WP_061642462.1 recombinase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3503.15 Da        Isoelectric Point: 7.9875

>T288873 WP_099560939.1 NZ_LR735429:c38961-38866 [Staphylococcus epidermidis]
MADILVNIMTTAASGCIVALFSYWLRKRDDK

Download         Length: 96 bp

Antitoxin


Download         Length: 37 bp

>AT288873 NZ_LR735429:38805-38841 [Staphylococcus epidermidis]
ATGCACCAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References