Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 1671212..1671717 Replicon chromosome
Accession NZ_LR214441
Organism Tessaracoccus lapidicaptus isolate TLA_E

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag TLA_RS07715 Protein ID WP_078919878.1
Coordinates 1671212..1671478 (-) Length 89 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag TLA_RS07720 Protein ID WP_076063562.1
Coordinates 1671475..1671717 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
TLA_RS07700 1667073..1668032 - 960 WP_078919875.1 aldo/keto reductase -
TLA_RS07705 1668903..1669655 + 753 WP_078919877.1 potassium channel family protein -
TLA_RS07710 1669706..1670944 - 1239 WP_078919578.1 IS110 family transposase -
TLA_RS07715 1671212..1671478 - 267 WP_078919878.1 Txe/YoeB family addiction module toxin Toxin
TLA_RS07720 1671475..1671717 - 243 WP_076063562.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
TLA_RS07725 1671903..1674164 - 2262 WP_197971720.1 pyruvate dehydrogenase -
TLA_RS07730 1674252..1675088 - 837 WP_078919880.1 carbohydrate ABC transporter permease -
TLA_RS07735 1675085..1675882 - 798 WP_078920441.1 sugar ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(8-87)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-68)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10265.97 Da        Isoelectric Point: 10.1636

>T288316 WP_078919878.1 NZ_LR214441:c1671478-1671212 [Tessaracoccus lapidicaptus]
VNSWTLVYSRQAQKDAKKLASPGLKTKAQHLLEVLAQDPFTTPPKYEKLVGALVGCYSRRINIQHRLVYEVLPERHVVHI
LRMWTHYE

Download         Length: 267 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 8689.63 Da        Isoelectric Point: 3.9557

>AT288316 WP_076063562.1 NZ_LR214441:c1671717-1671475 [Tessaracoccus lapidicaptus]
MTAVSATSARANLYRLIDQVNEESEPLTITGQRGNAVLVGEEDWLAIQETLFLESVPGLAESIRRARAEGVDAGSTELDW

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References